Detailed information of OS493_003374-T1 in Lophelia pertusa

Genomic Location: scaffold_7:772801...775589
NR annotation: KAJ7393715.1, ESX homeobox 1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q91V10Visual system homeobox 1 OS=Mus musculus OX=10090 GN=Vsx1 PE=1 SV=1
Q9GMA3Visual system homeobox 1 OS=Bos taurus OX=9913 GN=VSX1 PE=2 SV=1
Q9NZR4Visual system homeobox 1 OS=Homo sapiens OX=9606 GN=VSX1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001356DomainHomeobox domainInterproscan
IPR050877FamilyEMX/VAX/Noto Homeobox Transcription FactorsInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24339HOMEOBOX PROTEIN EMX-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan

Expression pattern
 Expression trend for OS493_003374-T1 global co-expression network
TOP