Detailed information of OS493_003095-T1 in Lophelia pertusa

Genomic Location: scaffold_6:5260880...5276240
NR annotation: KAJ7340352.1, hypothetical protein OS493_003095 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9Y4F3Meiosis regulator and mRNA stability factor 1 OS=Homo sapiens OX=9606 GN=MARF1 PE=1 SV=6
E1BP74Meiosis regulator and mRNA stability factor 1 OS=Bos taurus OX=9913 GN=MARF1 PE=3 SV=2
E1BZ85Meiosis regulator and mRNA stability factor 1 OS=Gallus gallus OX=9031 GN=MARF1 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076RRM_1RNA recognition motifDomainInterproscan
PF01936NYNNYN domainDomainInterproscan
PF12872OST-HTHOST-HTH/LOTUS domainDomainInterproscan
PF11608MARF1_RRM1MARF1, RNA recognition motif 1DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR021139DomainNYN domainInterproscan
IPR024768FamilyMeiosis regulator and mRNA stability factor 1Interproscan
IPR025605DomainOST-HTH/LOTUS domainInterproscan
IPR034189DomainMARF1, RNA recognition motif 1Interproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR041966Homologous_superfamilyLOTUS-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14379LIMKAIN B LKAPInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004540Molecular FunctionRNA nuclease activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005777Cellular ComponentperoxisomeInterproscan
GO:0010468Biological Processregulation of gene expressionInterproscan
GO:1905762Molecular FunctionCCR4-NOT complex bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

Expression pattern
 Expression trend for OS493_003095-T1 global co-expression network
TOP