Detailed information of OS493_003093-T1 in Lophelia pertusa

Genomic Location: scaffold_6:5230659...5247636
NR annotation: KAJ7340350.1, cop9 signalosome complex subunit [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6NRT5COP9 signalosome complex subunit 1 OS=Xenopus laevis OX=8355 GN=csn1 PE=2 SV=1
Q13098COP9 signalosome complex subunit 1 OS=Homo sapiens OX=9606 GN=GPS1 PE=1 SV=4
Q99LD4COP9 signalosome complex subunit 1 OS=Mus musculus OX=10090 GN=Gps1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21151CSN1_CCOP9 signalosome complex subunit 1, C-terminal helixDomainInterproscan
PF10602RPN726S proteasome subunit RPN7RepeatInterproscan
PF01399PCIPCI domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR048624DomainCOP9 signalosome complex subunit 1, C-terminal helixInterproscan
IPR045135Domain26S proteasome regulatory subunit Rpn7, N-terminalInterproscan
IPR000717DomainProteasome component (PCI) domainInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR019585Family26S proteasome regulatory subunit Rpn7/COP9 signalosome complex subunit 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR1414526S PROTESOME SUBUNIT 6Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0008180Cellular ComponentCOP9 signalosomeInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12175GPS1, COPS1, CSN1; COP9 signalosome complex subunit 1-Ubiquitin systemko04121deepkoala

Expression pattern
 Expression trend for OS493_003093-T1 global co-expression network
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