Detailed information of OS493_003019-T1 in Lophelia pertusa

Genomic Location: scaffold_6:3803621...3807604
NR annotation: KAJ7340286.1, RNA demethylase alkbh5 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q08BA6RNA demethylase ALKBH5 OS=Danio rerio OX=7955 GN=alkbh5 PE=1 SV=1
Q6GPB5RNA demethylase ALKBH5 OS=Xenopus laevis OX=8355 GN=alkbh5 PE=2 SV=1
E1BH29RNA demethylase ALKBH5 OS=Bos taurus OX=9913 GN=ALKBH5 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF135322OG-FeII_Oxy_22OG-Fe(II) oxygenase superfamilyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032860FamilyRNA demethylase ALKBH5Interproscan
IPR037151Homologous_superfamilyAlpha-ketoglutarate-dependent dioxygenase AlkB-like superfamilyInterproscan
IPR027450DomainAlpha-ketoglutarate-dependent dioxygenase AlkB-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR32074RNA DEMETHYLASE ALKBH5Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006397Biological ProcessmRNA processingInterproscan
GO:0006406Biological ProcessmRNA export from nucleusInterproscan
GO:0035515Molecular Functionoxidative RNA demethylase activityInterproscan
GO:0035553Biological Processobsolete oxidative single-stranded RNA demethylationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10767ALKBH5; mRNA N6-methyladenine demethylaseEC:1.14.11.53
Messenger RNA biogenesisko03019deepkoala

Expression pattern
 Expression trend for OS493_003019-T1 global co-expression network
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