Detailed information of OS493_003018-T1 in Lophelia pertusa

Genomic Location: scaffold_6:3774401...3797426
NR annotation: KAJ7340285.1, hypothetical protein OS493_003018 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O08852Polycystin-1 OS=Mus musculus OX=10090 GN=Pkd1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12248Methyltransf_FAFarnesoic acid 0-methyl transferaseFamilyInterproscan
PF00801PKDPKD domainDomainInterproscan
PF15711ILEIInterleukin-like EMT inducerDomainInterproscan
PF01822WSCWSC domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR002889DomainCarbohydrate-binding WSCInterproscan
IPR022041DomainFarnesoic acid O-methyl transferaseInterproscan
IPR035986Homologous_superfamilyPKD domain superfamilyInterproscan
IPR000601DomainPKD domainInterproscan
IPR039477DomainILEI/PANDER domainInterproscan
IPR016186Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR018378Conserved_siteC-type lectin, conserved siteInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan
IPR001304DomainC-type lectin-likeInterproscan
IPR022409DomainPKD/Chitinase domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46730POLYCYSTIN-1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005261Molecular Functionmonoatomic cation channel activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006816Biological Processcalcium ion transportInterproscan

Expression pattern
 Expression trend for OS493_003018-T1 global co-expression network
TOP