Detailed information of OS493_002981-T1 in Lophelia pertusa

Genomic Location: scaffold_6:3020347...3026797
NR annotation: KAJ7340249.1, WD repeat domain phosphoinositide-interacting protein 2 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5ZHN3WD repeat domain phosphoinositide-interacting protein 2 OS=Gallus gallus OX=9031 GN=WIPI2 PE=2 SV=1
Q80W47WD repeat domain phosphoinositide-interacting protein 2 OS=Mus musculus OX=10090 GN=Wipi2 PE=1 SV=1
Q6AY57WD repeat domain phosphoinositide-interacting protein 2 OS=Rattus norvegicus OX=10116 GN=Wipi2 PE=1 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21032PROPPINPROPPINRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR048720FamilyPROPPINInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11227WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000422Biological Processautophagy of mitochondrionInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006497Biological Processprotein lipidationInterproscan
GO:0019898Cellular Componentextrinsic component of membraneInterproscan
GO:0032266Molecular Functionphosphatidylinositol-3-phosphate bindingInterproscan
GO:0034045Cellular Componentphagophore assembly site membraneInterproscan
GO:0034497Biological Processprotein localization to phagophore assembly siteInterproscan
GO:0044804Biological ProcessnucleophagyInterproscan
GO:0080025Molecular Functionphosphatidylinositol-3,5-bisphosphate bindingInterproscan

Expression pattern
 Expression trend for OS493_002981-T1 global co-expression network
TOP