Detailed information of OS493_002915-T1 in Lophelia pertusa

Genomic Location: scaffold_6:2181581...2205173
NR annotation: KAJ7340185.1, hypothetical protein OS493_002915 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q96JM7Lethal(3)malignant brain tumor-like protein 3 OS=Homo sapiens OX=9606 GN=L3MBTL3 PE=1 SV=2
Q8BLB7Lethal(3)malignant brain tumor-like protein 3 OS=Mus musculus OX=10090 GN=L3mbtl3 PE=1 SV=1
E1C2V1Lethal(3)malignant brain tumor-like protein 1 OS=Gallus gallus OX=9031 GN=L3MBTL1 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12140SLEDSLED domainDomainInterproscan
PF02820MBTmbt repeatDomainInterproscan
PF00536SAM_1SAM domain (Sterile alpha motif)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013761Homologous_superfamilySterile alpha motif/pointed domain superfamilyInterproscan
IPR001660DomainSterile alpha motif domainInterproscan
IPR021987DomainSLED domainInterproscan
IPR004092RepeatMbt repeatInterproscan
IPR038348Homologous_superfamilySLED domain superfamilyInterproscan
IPR050548FamilyPolycomb group and chromatin remodeling factorsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12247POLYCOMB GROUP PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan
GO:0045892Biological Processnegative regulation of DNA-templated transcriptionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11461SCMH1; polycomb protein SCMH1-Chromosome and associated proteinsko03036deepkoala

Expression pattern
 Expression trend for OS493_002915-T1 global co-expression network
TOP