Detailed information of OS493_002877-T1 in Lophelia pertusa

Genomic Location: scaffold_6:1612012...1648306
NR annotation: KAJ7340150.1, hypothetical protein OS493_002877 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6P5D8Structural maintenance of chromosomes flexible hinge domain-containing protein 1 OS=Mus musculus OX=10090 GN=Smchd1 PE=1 SV=2
A6NHR9Structural maintenance of chromosomes flexible hinge domain-containing protein 1 OS=Homo sapiens OX=9606 GN=SMCHD1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13589HATPase_c_3Histidine kinase-, DNA gyrase B-, and HSP90-like ATPaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038892FamilyStructural maintenance of chromosomes flexible hinge domain-containing protein 1Interproscan
IPR036890Homologous_superfamilyHistidine kinase/HSP90-like ATPase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22640UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006302Biological Processdouble-strand break repairInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K23113SMCHD1; structural maintenance of chromosomes flexible hinge domain-containing protein 1-DNA repair and recombination proteinsko03400deepkoala

Expression pattern
 Expression trend for OS493_002877-T1 global co-expression network
TOP