Detailed information of OS493_002788-T1 in Lophelia pertusa

Genomic Location: scaffold_6:365105...366442
NR annotation: KAJ7340065.1, hypothetical protein OS493_002788 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P56407Homeobox protein ceh-9 OS=Caenorhabditis elegans OX=6239 GN=ceh-9 PE=3 SV=2
Q9JLZ9Ventral anterior homeobox 2 OS=Rattus norvegicus OX=10116 GN=Vax2 PE=2 SV=1
Q9UIW0Ventral anterior homeobox 2 OS=Homo sapiens OX=9606 GN=VAX2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001356DomainHomeobox domainInterproscan
IPR050848FamilyHomeobox domain-containing transcription factorsInterproscan
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR020479DomainHomeobox domain, metazoaInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24333HOMEO BOX HB9 LIKE A-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24877VENTX; homeobox protein VENTX-Transcription factorsko03000deepkoala

Expression pattern
 Expression trend for OS493_002788-T1 global co-expression network
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