Detailed information of OS493_002653-T1 in Lophelia pertusa

Genomic Location: scaffold_5:5830467...5837230
NR annotation: KAJ7365922.1, hypothetical protein OS493_002653 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A0A2J6RX17Nucleotide-binding leucine-rich repeat (NLR)-like protein OS=Hyaloscypha variabilis (strain UAMH 11265 / GT02V1 / F) OX=1149755 GN=L207DRAFT_509616 PE=1 SV=1
Q07617Sperm-associated antigen 1 OS=Homo sapiens OX=9606 GN=SPAG1 PE=1 SV=3
Q80ZX8Sperm-associated antigen 1 OS=Mus musculus OX=10090 GN=Spag1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01753zf-MYNDMYND fingerDomainInterproscan
PF13229Beta_helixRight handed beta helix regionRepeatInterproscan
PF00931NB-ARCNB-ARC domainDomainInterproscan
PF00515TPR_1Tetratricopeptide repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR002893DomainZinc finger, MYND-typeInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR011050Homologous_superfamilyPectin lyase fold/virulence factorInterproscan
IPR012334Homologous_superfamilyPectin lyase foldInterproscan
IPR039448DomainRight handed beta helix domainInterproscan
IPR006626RepeatParallel beta-helix repeatInterproscan
IPR002182DomainNB-ARCInterproscan
IPR051966FamilyRNA polymerase II-associated protein 3Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46423RNA POLYMERASE II-ASSOCIATED PROTEIN 3Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0043531Molecular FunctionADP bindingInterproscan
GO:0101031Cellular Componentprotein folding chaperone complexInterproscan

Expression pattern
 Expression trend for OS493_002653-T1 global co-expression network
TOP