| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| OS493_002653-T1 | RNA POLYMERASE II-ASSOCIATED PROTEIN 3 | scaffold_5 | 5830467 | 5837230 | - |
| CDS | |||||
| OS493_002653-T1 | |||||
| Transcript |
| OS493_002653-T1 |
| Protein |
| OS493_002653-T1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00515 | TPR_1 | Tetratricopeptide repeat | Repeat | Interproscan |
| PF00931 | NB-ARC | NB-ARC domain | Domain | Interproscan |
| PF01753 | zf-MYND | MYND finger | Domain | Interproscan |
| PF13229 | Beta_helix | Right handed beta helix region | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002182 | Domain | NB-ARC | Interproscan |
| IPR002893 | Domain | Zinc finger, MYND-type | Interproscan |
| IPR006626 | Repeat | Parallel beta-helix repeat | Interproscan |
| IPR011050 | Homologous_superfamily | Pectin lyase fold/virulence factor | Interproscan |
| IPR011990 | Homologous_superfamily | Tetratricopeptide-like helical domain superfamily | Interproscan |
| IPR012334 | Homologous_superfamily | Pectin lyase fold | Interproscan |
| IPR019734 | Repeat | Tetratricopeptide repeat | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR039448 | Domain | Right handed beta helix domain | Interproscan |
| IPR051966 | Family | RNA polymerase II-associated protein 3 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46423 | RNA POLYMERASE II-ASSOCIATED PROTEIN 3 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0043531 | Molecular Function | ADP binding | Interproscan |
| GO:0101031 | Cellular Component | protein folding chaperone complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for OS493_002653-T1 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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