Detailed information of OS493_002636-T1 in Lophelia pertusa

Genomic Location: scaffold_5:5643546...5664051
NR annotation: KAJ7365906.1, hypothetical protein OS493_002636 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9WYJ1L-threonine ammonia-lyase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=TM_0356 PE=1 SV=1
Q99U50L-threonine dehydratase catabolic TdcB OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) OX=158878 GN=tdcB PE=3 SV=1
Q7A5L8L-threonine dehydratase catabolic TdcB OS=Staphylococcus aureus (strain N315) OX=158879 GN=tdcB PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00291PALPPyridoxal-phosphate dependent enzymeFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036052Homologous_superfamilyTryptophan synthase beta chain-like, PALP domain superfamilyInterproscan
IPR050147FamilySerine/Threonine DehydrataseInterproscan
IPR001926DomainTryptophan synthase beta chain-like, PALP domainInterproscan
IPR000634Binding_siteSerine/threonine dehydratase, pyridoxal-phosphate-binding siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48078THREONINE DEHYDRATASE, MITOCHONDRIAL-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003941Molecular FunctionL-serine ammonia-lyase activityInterproscan
GO:0004794Molecular Functionthreonine deaminase activityInterproscan
GO:0006565Biological ProcessL-serine catabolic processInterproscan
GO:0006567Biological Processthreonine catabolic processInterproscan
GO:0009097Biological Processisoleucine biosynthetic processInterproscan
GO:0006520Biological Processamino acid metabolic processInterproscan
GO:0030170Molecular Functionpyridoxal phosphate bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01754E4.3.1.19, ilvA, tdcB; threonine dehydrataseEC:4.3.1.19
Valine, leucine and isoleucine biosynthesisko00290deepkoala

Expression pattern
 Expression trend for OS493_002636-T1 global co-expression network
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