Detailed information of OS493_002582-T1 in Lophelia pertusa

Genomic Location: scaffold_5:4823970...4836757
NR annotation: KAJ7365860.1, LIM and senescent cell antigen-like-containing domain protein 2 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q99JW4LIM and senescent cell antigen-like-containing domain protein 1 OS=Mus musculus OX=10090 GN=Lims1 PE=1 SV=3
P48059LIM and senescent cell antigen-like-containing domain protein 1 OS=Homo sapiens OX=9606 GN=LIMS1 PE=1 SV=4
Q2KJ33LIM and senescent cell antigen-like-containing domain protein 2 OS=Bos taurus OX=9913 GN=LIMS2 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00412LIMLIM domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001781DomainZinc finger, LIM-typeInterproscan
IPR047946FamilyLIM and senescent cell antigen-like-containing domain protein 1/2-likeInterproscan
IPR047944DomainLIMS1/2-like, LIM domain 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24210LIM DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005925Cellular Componentfocal adhesionInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005911Cellular Componentcell-cell junctionInterproscan
GO:0045216Biological Processcell-cell junction organizationInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan
GO:1900026Biological Processpositive regulation of substrate adhesion-dependent cell spreadingInterproscan
GO:2001046Biological Processpositive regulation of integrin-mediated signaling pathwayInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K23354LIMS1_2, PINCH1_2; LIM and senescent cell antigen-like-containing domain protein 1/2-Domain-containing proteins not elsewhere classifiedko04990deepkoala

Expression pattern
 Expression trend for OS493_002582-T1 global co-expression network
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