Gene detail

Detailed information of OS493_002568-T1 in Lophelia pertusa Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
OS493_002568-T1	UNCHARACTERIZED	scaffold_5	4616224	4636273	-

Gene Structure

More details in Jbrowse Sequence

CDS

OS493_002568-T1

ATGTCAGATGAAGCTTCTCGAGAAACTTGCCGGCAAATTGTTTTTCTCATCGACTTGAATCCTTCGTTTTGGGGATCCAACTACTGCGCCAAAGACACAGCGAACGCCATTCGATTATGCGTGCTAAGAGTCCTCACGTACTTCAGTGATTACGGCAGTGGAAAGAGATCAAATCTACGATGGGGATACAAATTCTTCAACTCCAGGTCACTTTCACATCAATTTGAACGACATGAGTTCAAAGAATTCTCTGTAGATGTCTTTGAAGAATTTGAAAATCAGGTGTCCAAGAGTTCACGATTTTCAGTGGAGAGACCAGACATAAGTTCGCCAGTAAGAAGAACTCGGGGAAATGAAAACTCGCTTCATGGCAACGGAACAAAGACACGAAATGTTATGATTTTGTTGAGTGGTTGTCCTTGCGACGATGGCTCGATCTCAGACTTTACTGGTGAAAAATCATCATCTCTAACAACGCTGGATGGTGTCAAGAATATTCTGATGCCATCAGTGTTGTACAATGAATTTAAAGAAAGACGCATTTGTTTGCAGTGGGTAAACATTGGAAATGTCCAACACGAGAAGAATACCAGCTTGAAATCATTATTGGATGGTTTTGTGGAACAGCTTGGAGGATGCCTGATGCCTCTTTCAGCAGTCATTAATACTGGAAATATTTTCTCAGAGGGGTTTGGTGTAACAAGTGGATCTGGAACAGATGTCACATCCTGTTCTAGTCATGGAGCATTATTTCCTTTTAAAACTGTCATGGATTTCTATTTCTGTGGAAAGATGACAAAGCTATCAGAAGTAGTCACACAACAGTACTTTGAAAAGGAGCTGGGGTGTTCTGAGACCACAGGATTACTGTGTTCTTCAGGTACTGATGACAAAGTTCATTGTTCTGTAAGACTACATTCCATGTTCCAGCCAGTGGCAGGACTGCAAGGCGCAGGAGATTGTCATCATTCCACTGTTACTGAACCTGCCGATATAACAGCCAAAGCTTCAACATCAACTGAATACAGAAGCTCTCCTAATCCTCTGTGGATCAGAGGAGTAATAAATCATGCTTGTGTGTGTCCAACATGGTTACACCCCACAAAGGGATACTCTTGCATTGGCATGGATGGCAGACATACAGTTGATTCAACAAACTCTGCTTTGTGTTCTCACGGGTTTATTTCTGGCTGGTTCCAAGAACTCTTACTTTCCTTGGCAAAAGACAACAAACTTCTGGTTCTTGATTTCATTGACTGTGATAGTGGATTACCAGTTAGTGGAGTCCTTCAGCCCTTGACCTCTGTCTGTGGTGTCATAAATGTTATTGCATCAGATTTTCTTGTGACGTTTGAAAAGCTACTTCTTTGGAACGGAAAGACTTCAGTGCTGGATAGGAAAAATATGGAAAGTCTGGAAACCTCCCAGCATTTGGTCCATGAGCACAGATCCAAAACTGTTTCTAAACCAGCTGAACCACTTAGATACAATGAAGTATTTCTCAAGCTTACAGGATCACAGAATAACCTGCAAGATCTGACAACAACTGATGCAAGGGAATTTGAAGCTGGGTTTGTTGATCCATGGTGCTCTTTTCCTGTTGTTGATAACAACAGGTCACTCTGGAGTGAACTGACAAGAGGTAATGAGTCTGAAGAAGAGGAAGAAGATGATGATGACAGTGAAGCTACTCTAATGAAAGAACTGAAGAATCTTTATAACAGTAAAGAAACAAAGTCAACATCAACAGTTGTTAATGGAACACAATCACCAAAACAGTTTAAAGAGGAAGTTAAACACTCCAACGAAATCAAAGGTGAAAAAGGATGCATTGAAGCTGAGATCTTGTTACAAATTCCTAAGAAGCCGGGTTCAAGGTCTCTTCAAAGTCTTGGCAGTGGTAGAAATGTTGACAAGGAAACAAAAAATGATGATGAAAACAGCAAATTGGGTGAAAATGAAAGCCAACCTGCAGTTGAGAAGAATATAAAAATAATAGAAGATAGTTGTACCACAGAAGACAAGCTGACAGCCAATAGCACTGGAACACAAGGCATCCCATGTGATATCCAAGATGAAGCTCAGTTGGTGAAGGACATTCATGATTTATGTGACAAAATTATTTTGGAGGGAGCAAGTATAGAAATCACCAACATAGTGACACTAATTTCAATGTTTTATAATGGAGACAATGGCAGACAGAAGGATTGTGTTTCACAGTTTCTAGGAGAGAATGTACTCCTGTCAATATCAACACTTAGAGAAAAATATGAAGGGTGCAATGATGTCATCAGAACAGGACAACAAGTCAGAGAGTACCAGCTCCAAATCCTACTTCGAATGGAGATGTCAGTTCTTACAAATGCTGATGAAAAAAGTTCCCTTGTTGAAGAGGTGACTGTACTGTTACGAGCCATCTCATTCATGAAGGACCCTAAGTTCCTCAGTGTTTATCTACACGAGGTACTTCTTCAAAGGTACAGCCGCAGTCTTCCCAAGTTCCTGTGTGGTGTTTATGAGGGTCTGATGATGCGTCCTCCCAGGGATGTGTTGACACCCTCCAAATGGTCCAGTGATGATGAGTCGCCAGTCAGACGCTCTGTCAACTCGAATTCCAGCGCTAAACAAGATTCCAGTCAACCAAGGAGCAGTGGATGCCGTATTCTTACCCGCCATTTGAGTGTCGCAGATGTTGGTAAAAGAAGAGAGATCGTTGTACCTGGGAAGGCAAAACCAAAAGATAAAGAGAAGAAAAAGAAGGAAAAACCACATGGGTCCAATAATTCACGAGGTGTAAACAAGAAGGAGGAGAAGAAAACTAGAGGCCAGAAAACACCTGTTAAACTAGTCAGACGAAATCTGTTCACGGAATCTGAGGAAGAGGGAGGGAAAAACGAGCAAGCTAGACGACGATTTCACCGGAGGAATACTGTGGGGTCTTTTTCAAAATCCGCTGTTCAAGAGACTCCGGCTCATAAACAAGTATCTCATGCATTGTGGTGTAAACAAGATCGTGCAAGGAAACGTTCCAGTGCTTATACTGCAGAGGTGCCTGTTTTACAGGAGTCACCCTTAAAAGAGTTACAAGCAGGAGAGGGTCTTCCTCGAAGAAGTCCTCGGAGGCACCCAGCGGTGATCTTCCAGCGGAGCCAGTCATTTTATGGGCGCTCGGCGAGTGCAGGCCCACTGACCAGGACCAGGTCCTTCACTGGGACGTATTCTTGTGACTCCCCAAAGAAAGAGCCCACCGAGGGATCGGGTTCCATTCCCTGTAAAGAGACCGTTGTTAAGAAGACGCCTCAGAAGATGTCGTCTGCTGCTCTCTCGCCGTTGCGGTTCTCTCCTCGGCACAAGAAGAAGTTTTCTCTGCACAGTTTGTTGAACACAGCAAAAGGATTCGATCAAAAGGAAGACAGTTTGCCAAGTGGTCAGAGACCGACGACACCTAAAGAAAAGCTTATCGCTACAAGGTCTTCTCCAAGACTTCTTAAACAGCGCTCTTTTTCTTGCATTGGATTTTCGTCTGTTCCTTTTCCTGGAGTTCAGAAAGAGAAGTTAGATCCTCTTCGTGGAAAGCCCAGATCATTTGAAAATACAAGCCGCCAGTCACCAGTAGAGGAGGAAGTTTGCTCAGATGATGTTTTACATGAAGATTTGATGAAAACACAGAAGAAAGAGAACGCAGAAAAGCTTTCAGACGTCGGAGTGATCACTCCAAAATCTACTATTGCGCAGTCACAAAAACGAACTCCATTGAAAGATTATCAAATCGACGAATGTGTCGTTCTTATCACGCCAATTCGAAATCCCTTGAAGTCACCCGTGCAGGTTTCTCCGAAGGTTATAGCAGCAGACCCTTCTTCAGACCACGCCCAACCACGTGTTATTGACTCATCAAAACATTTCGACGAATCTGCAGGAGTGTCCGATGCAAACACAGGAACGCCTGTAAAGAAAGTGGTCAGTCCTCCAGCTGTTCGCAGCTCGCCAAGGTTACTCAGCAAATGGGACATTCCAGACTCTTCCAAAGTAACATTGAGCGACACTTTGTGTCAATCTACATCGAAGGATGTAAAGATTACGAAGTCTAGCTCTGTAGTCTCTCCAAAGTCGAGCAGGGATGATCTGAGAAAGCCCAGAACTCCAGTTAAGGATCATCATCTGGACGACTTTGTGGTACTTCTCACTCCCATCAGGAGGCCTATATCATCACCAGTACACCTGCGATCACAACAAAACAACGCGATAGTCACTTGTTCGGATTCCGAAAGCACTGTACAACTAAACGGCGTAATATCTCAACAGCAACGGAAGGAACGGAAAGAATCGCTGACTTGCATGGAGATGTGA

Transcript

OS493_002568-T1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15292	Treslin_N	Treslin N-terminus	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR026153	Family	Treslin	Interproscan
IPR032746	Domain	Treslin, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21556	UNCHARACTERIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003682	Molecular Function	chromatin binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006260	Biological Process	DNA replication	Interproscan
GO:0007095	Biological Process	mitotic G2 DNA damage checkpoint signaling	Interproscan
GO:0010212	Biological Process	response to ionizing radiation	Interproscan
GO:0030174	Biological Process	regulation of DNA-templated DNA replication initiation	Interproscan
GO:0033314	Biological Process	mitotic DNA replication checkpoint signaling	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for OS493_002568-T1 global RNA-seq network