Detailed information of OS493_002477-T1 in Lophelia pertusa

Genomic Location: scaffold_5:2795438...2795989
NR annotation: KAJ7365760.1, Homeobox domain [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6XYB7Transcription factor LBX2 OS=Homo sapiens OX=9606 GN=LBX2 PE=1 SV=1
Q804R0Transcription factor LBX2 OS=Danio rerio OX=7955 GN=lbx2 PE=1 SV=1
Q0P4H6Transcription factor LBX1 OS=Xenopus tropicalis OX=8364 GN=lbx1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001356DomainHomeobox domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR051000FamilyHomeobox DNA-bindingInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24324HOMEOBOX PROTEIN HHEXInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0030154Biological Processcell differentiationInterproscan

Expression pattern
 Expression trend for OS493_002477-T1 global co-expression network
TOP