Detailed information of OS493_002402-T1 in Lophelia pertusa

Genomic Location: scaffold_5:1717586...1722961
NR annotation: KAJ7365687.1, Ubiquilin-4 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9UMX0Ubiquilin-1 OS=Homo sapiens OX=9606 GN=UBQLN1 PE=1 SV=2
Q5R684Ubiquilin-1 OS=Pongo abelii OX=9601 GN=UBQLN1 PE=2 SV=1
Q8R317Ubiquilin-1 OS=Mus musculus OX=10090 GN=Ubqln1 PE=1 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Alpha-Helix|UBA

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00627UBAUBA/TS-N domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015940DomainUbiquitin-associated domainInterproscan
IPR009060Homologous_superfamilyUBA-like superfamilyInterproscan
IPR015496FamilyUbiquilinInterproscan
IPR006636DomainHeat shock chaperonin-bindingInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10677UBIQUILINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0031593Molecular Functionpolyubiquitin modification-dependent protein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04523UBQLN, DSK2; ubiquilin-Proteasomeko03051deepkoala

Expression pattern
 Expression trend for OS493_002402-T1 global co-expression network
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