Detailed information of OS493_002209-T1 in Lophelia pertusa

Genomic Location: scaffold_4:6837701...6841370
NR annotation: KAJ7375440.1, hypothetical protein OS493_002209 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q17134T-box transcription factor T homolog 1 OS=Branchiostoma floridae OX=7739 GN=TBXT PE=2 SV=1
P80492T-box transcription factor T homolog 2 OS=Branchiostoma floridae OX=7739 GN=TBXT PE=2 SV=1
O15178T-box transcription factor T OS=Homo sapiens OX=9606 GN=TBXT PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00907T-boxT-boxDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002070FamilyTranscription factor, BrachyuryInterproscan
IPR046360DomainT-box transcription factor, DNA-binding domainInterproscan
IPR018186Conserved_siteTranscription factor, T-box, conserved siteInterproscan
IPR001699FamilyT-box transcription factorInterproscan
IPR008967Homologous_superfamilyp53-like transcription factor, DNA-binding domain superfamilyInterproscan
IPR036960Homologous_superfamilyT-box superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11267T-BOX PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0045893Biological Processpositive regulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0001707Biological Processmesoderm formationInterproscan
GO:0001708Biological Processcell fate specificationInterproscan
GO:0003007Biological Processheart morphogenesisInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10172BRA, T; brachyury protein-Transcription factorsko03000deepkoala

Expression pattern
 Expression trend for OS493_002209-T1 global co-expression network
TOP