Detailed information of OS493_002206-T1 in Lophelia pertusa

Genomic Location: scaffold_4:6816299...6825359
NR annotation: KAJ7375439.1, C-type lectin domain 17, member [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P48304Lithostathine-1-beta OS=Homo sapiens OX=9606 GN=REG1B PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00059Lectin_CLectin C-type domainDomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742DomainEGF-like domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR001304DomainC-type lectin-likeInterproscan
IPR016186Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR051505FamilyC-type lectin domain-containing proteinInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14789CHONDROLECTIN VARIANT CHODLFDELTAE.Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0009897Cellular Componentexternal side of plasma membraneInterproscan
GO:0016477Biological Processcell migrationInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0050840Molecular Functionextracellular matrix bindingInterproscan
GO:1990430Molecular Functionextracellular matrix protein bindingInterproscan

Expression pattern
 Expression trend for OS493_002206-T1 global co-expression network
TOP