Detailed information of OS493_002086-T1 in Lophelia pertusa

Genomic Location: scaffold_4:4919860...4924220
NR annotation: KAJ7375335.1, E3 ubiquitin-protein ligase ubr3 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
F1QJX5E3 ubiquitin-protein ligase ubr3 OS=Danio rerio OX=7955 GN=ubr3 PE=2 SV=2
Q9W3M3E3 ubiquitin-protein ligase Ubr3 OS=Drosophila melanogaster OX=7227 GN=Ubr3 PE=1 SV=4
Q6ZT12E3 ubiquitin-protein ligase UBR3 OS=Homo sapiens OX=9606 GN=UBR3 PE=1 SV=2
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity|UBR-box

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02207zf-UBRPutative zinc finger in N-recognin (UBR box)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR039164FamilyE3 ubiquitin-protein ligase UBR1-likeInterproscan
IPR003126DomainZinc finger, UBR-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21497UBIQUITIN LIGASE E3 ALPHA-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000151Cellular Componentubiquitin ligase complexInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0071596Biological Processubiquitin-dependent protein catabolic process via the N-end rule pathwayInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

Expression pattern
 Expression trend for OS493_002086-T1 global co-expression network
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