Detailed information of OS493_002084-T1 in Lophelia pertusa Gene info
Gene IDAnnotationScaffoldStartEndStrand
OS493_002084-T1UBIQUITIN LIGASE E3 ALPHA-RELATEDscaffold_448921854912289-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00620RhoGAPRhoGAP domainDomainInterproscan
PF14555UBA_4UBA-like domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000198DomainRho GTPase-activating protein domainInterproscan
IPR008936Homologous_superfamilyRho GTPase activation proteinInterproscan
IPR009060Homologous_superfamilyUBA-like superfamilyInterproscan
IPR039164FamilyE3 ubiquitin-protein ligase UBR1-likeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR21497UBIQUITIN LIGASE E3 ALPHA-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000151Cellular Componentubiquitin ligase complexInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0071596Biological Processubiquitin-dependent protein catabolic process via the N-end rule pathwayInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

Expression pattern
 1. Expression trend for OS493_002084-T1 global RNA-seq network
TOP