Detailed information of OS493_002050-T1 in Lophelia pertusa

Genomic Location: scaffold_4:4479811...4484195
NR annotation: KAJ7375302.1, Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8BXK8Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 OS=Mus musculus OX=10090 GN=Agap1 PE=1 SV=1
Q8VHH5Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 OS=Mus musculus OX=10090 GN=Agap3 PE=1 SV=1
Q96P47Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 OS=Homo sapiens OX=9606 GN=AGAP3 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF01412ArfGapPutative GTPase activating protein for ArfDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR001164DomainArf GTPase activating proteinInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR051282FamilyArf-GAP with GTPase, ANK repeat and PH domain-containing proteinInterproscan
IPR037278Homologous_superfamilyARFGAP/RecO-like zinc fingerInterproscan
IPR001849DomainPleckstrin homology domainInterproscan
IPR038508Homologous_superfamilyArfGAP domain superfamilyInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45819CENTAURIN-GAMMA-1AInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005096Molecular FunctionGTPase activator activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0090630Biological Processactivation of GTPase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K18849BMT2; 25S rRNA (adenine2142-N1)-methyltransferaseEC:2.1.1.286
Ribosome biogenesisko03009deepkoala

Expression pattern
 Expression trend for OS493_002050-T1 global co-expression network
TOP