Detailed information of OS493_001987-T1 in Lophelia pertusa

Genomic Location: scaffold_4:3568018...3583716
NR annotation: KAJ7375242.1, hypothetical protein OS493_001987 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6DIF4WD repeat-containing protein 1 OS=Xenopus tropicalis OX=8364 GN=wdr1 PE=2 SV=1
O93277WD repeat-containing protein 1 OS=Gallus gallus OX=9031 GN=WDR1 PE=2 SV=1
Q6PAX7WD repeat-containing protein 1-B OS=Xenopus laevis OX=8355 GN=wdr1-b PE=2 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19856WD-REPEATCONTAINING PROTEIN WDR1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0030042Biological Processactin filament depolymerizationInterproscan
GO:0030864Cellular Componentcortical actin cytoskeletonInterproscan
GO:0040011Biological ProcesslocomotionInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan

Expression pattern
 Expression trend for OS493_001987-T1 global co-expression network
TOP