Detailed information of OS493_001656-T1 in Lophelia pertusa

Genomic Location: scaffold_3:7687284...7701858
NR annotation: KAJ7381508.1, hypothetical protein OS493_001656 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5RCV3Nibrin OS=Pongo abelii OX=9601 GN=NBN PE=2 SV=2
O60934Nibrin OS=Homo sapiens OX=9606 GN=NBN PE=1 SV=1
Q9JIL9Nibrin OS=Rattus norvegicus OX=10116 GN=Nbn PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08599Nbs1_CDNA damage repair protein Nbs1FamilyInterproscan
PF16508NIBRIN_BRCT_IISecond BRCT domain on Nijmegen syndrome breakage proteinDomainInterproscan
PF16770RTT107_BRCT_5Regulator of Ty1 transposition protein 107 BRCT domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036420Homologous_superfamilyBRCT domain superfamilyInterproscan
IPR040227FamilyNibrin-relatedInterproscan
IPR043014Homologous_superfamilyNibrin, second BRCT domain superfamilyInterproscan
IPR001357DomainBRCT domainInterproscan
IPR013908DomainNibrin, C-terminalInterproscan
IPR032429DomainNibrin, second BRCT domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12162NIBRIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000724Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0003684Molecular Functiondamaged DNA bindingInterproscan
GO:0006302Biological Processdouble-strand break repairInterproscan
GO:0007095Biological Processmitotic G2 DNA damage checkpoint signalingInterproscan
GO:0030870Cellular ComponentMre11 complexInterproscan
GO:0032508Biological ProcessDNA duplex unwindingInterproscan

Expression pattern
 Expression trend for OS493_001656-T1 global co-expression network
TOP