Detailed information of OS493_001639-T1 in Lophelia pertusa

Genomic Location: scaffold_3:7173355...7292039
NR annotation: KAJ7381491.1, WW domain containing E3 ubiquitin protein ligase 1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8C863E3 ubiquitin-protein ligase Itchy OS=Mus musculus OX=10090 GN=Itch PE=1 SV=2
Q9DBH0NEDD4-like E3 ubiquitin-protein ligase WWP2 OS=Mus musculus OX=10090 GN=Wwp2 PE=1 SV=1
Q8BZZ3NEDD4-like E3 ubiquitin-protein ligase WWP1 OS=Mus musculus OX=10090 GN=Wwp1 PE=1 SV=2
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity|HECT

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00168C2C2 domainDomainInterproscan
PF00632HECTHECT-domain (ubiquitin-transferase)DomainInterproscan
PF00397WWWW domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000008DomainC2 domainInterproscan
IPR036020Homologous_superfamilyWW domain superfamilyInterproscan
IPR000569DomainHECT domainInterproscan
IPR001202DomainWW domainInterproscan
IPR035983Homologous_superfamilyHECT, E3 ligase catalytic domainInterproscan
IPR035892Homologous_superfamilyC2 domain superfamilyInterproscan
IPR050409FamilyE3 ubiquitin-protein ligaseInterproscan
IPR024928FamilyE3 ubiquitin-protein ligase, SMURF1 typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11254HECT DOMAIN UBIQUITIN-PROTEIN LIGASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0043161Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K05633WWP1, AIP5; NEDD4-like E3 ubiquitin-protein ligase WWP1EC:2.3.2.26
Ubiquitin systemko04121deepkoala

Expression pattern
 Expression trend for OS493_001639-T1 global co-expression network
TOP