Detailed information of OS493_001611-T1 in Lophelia pertusa

Genomic Location: scaffold_3:6144895...6290482
NR annotation: KAJ7381473.1, Cleavage and polyadenylation specificity factor subunit 1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q10570Cleavage and polyadenylation specificity factor subunit 1 OS=Homo sapiens OX=9606 GN=CPSF1 PE=1 SV=2
Q10569Cleavage and polyadenylation specificity factor subunit 1 OS=Bos taurus OX=9913 GN=CPSF1 PE=1 SV=1
Q9EPU4Cleavage and polyadenylation specificity factor subunit 1 OS=Mus musculus OX=10090 GN=Cpsf1 PE=1 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DDB1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10433MMS1_NMono-functional DNA-alkylating methyl methanesulfonate N-termRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018846DomainCleavage/polyadenylation specificity factor, A subunit, N-terminalInterproscan
IPR050358FamilyRSE1/DDB1/CFT1/CPSF1Interproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10644DNA REPAIR/RNA PROCESSING CPSF FAMILYInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005847Cellular ComponentmRNA cleavage and polyadenylation specificity factor complexInterproscan
GO:0006378Biological Processobsolete mRNA polyadenylationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

Expression pattern
 Expression trend for OS493_001611-T1 global co-expression network
TOP