Detailed information of OS493_001548-T1 in Lophelia pertusa

Genomic Location: scaffold_3:4364084...4413000
NR annotation: KAJ7381413.1, putative ubiquitin carboxyl-terminal hydrolase FAF-X [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q93008Ubiquitin carboxyl-terminal hydrolase 9X OS=Homo sapiens OX=9606 GN=USP9X PE=1 SV=4
P70398Ubiquitin carboxyl-terminal hydrolase 9X OS=Mus musculus OX=10090 GN=Usp9x PE=1 SV=2
O00507Ubiquitin carboxyl-terminal hydrolase 9Y OS=Homo sapiens OX=9606 GN=USP9Y PE=1 SV=2
 Gene family
Gene familySubfamily
Ubiquitin FamilyDUB|USP|USP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12030DUF3517Domain of unknown function (DUF3517)FamilyInterproscan
PF00443UCHUbiquitin carboxyl-terminal hydrolaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018200Conserved_siteUbiquitin specific protease, conserved siteInterproscan
IPR050164FamilyUbiquitin carboxyl-terminal hydrolasesInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR021905DomainUbiquitin C-terminal hydrolase-like, DUF3517Interproscan
IPR001394DomainPeptidase C19, ubiquitin carboxyl-terminal hydrolaseInterproscan
IPR028889DomainUbiquitin specific protease domainInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24006UBIQUITIN CARBOXYL-TERMINAL HYDROLASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004843Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0016477Biological Processcell migrationInterproscan
GO:0016579Biological Processprotein deubiquitinationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11840USP9_24; ubiquitin carboxyl-terminal hydrolase 9/24EC:3.4.19.12
Ubiquitin systemko04121deepkoala

Expression pattern
 Expression trend for OS493_001548-T1 global co-expression network
TOP