| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| OS493_001544-T1 | E3 UBIQUITIN-PROTEIN LIGASE TRIP12 | scaffold_3 | 4307273 | 4311055 | + |
| CDS | |||||
| OS493_001544-T1 | |||||
| Transcript |
| OS493_001544-T1 |
| Protein |
| OS493_001544-T1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E3|E3 activity|HECT |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00632 | HECT | HECT-domain (ubiquitin-transferase) | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000569 | Domain | HECT domain | Interproscan |
| IPR035983 | Homologous_superfamily | HECT, E3 ligase catalytic domain | Interproscan |
| IPR045322 | Family | E3 ubiquitin-protein ligase HECTD1/TRIP12-like | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45670 | E3 UBIQUITIN-PROTEIN LIGASE TRIP12 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000209 | Biological Process | protein polyubiquitination | Interproscan |
| GO:0004842 | Molecular Function | ubiquitin-protein transferase activity | Interproscan |
| GO:0006511 | Biological Process | ubiquitin-dependent protein catabolic process | Interproscan |
| GO:0016607 | Cellular Component | nuclear speck | Interproscan |
| GO:0043161 | Biological Process | proteasome-mediated ubiquitin-dependent protein catabolic process | Interproscan |
| GO:0061630 | Molecular Function | ubiquitin protein ligase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for OS493_001544-T1 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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