Detailed information of OS493_001414-T1 in Lophelia pertusa

Genomic Location: scaffold_3:979921...1014305
NR annotation: KAJ7381293.1, Transcriptional repressor NF-X1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q12986Transcriptional repressor NF-X1 OS=Homo sapiens OX=9606 GN=NFX1 PE=1 SV=2
A6QLA0Transcriptional repressor NF-X1 OS=Bos taurus OX=9913 GN=NFX1 PE=2 SV=1
B1AY10Transcriptional repressor NF-X1 OS=Mus musculus OX=10090 GN=Nfx1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01424R3HR3H domainDomainInterproscan
PF01422zf-NF-X1NF-X1 type zinc fingerFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001374DomainR3H domainInterproscan
IPR000967DomainZinc finger, NF-X1-typeInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR034078FamilyTranscription factor NFX1 familyInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR036867Homologous_superfamilyR3H domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12360NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12236NFX1; transcriptional repressor NF-X1-Ubiquitin systemko04121deepkoala

Expression pattern
 Expression trend for OS493_001414-T1 global co-expression network
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