Detailed information of OS493_001355-T1 in Lophelia pertusa

Genomic Location: scaffold_3:182167...203560
NR annotation: KAJ7381239.1, hypothetical protein OS493_001355 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q4W5Z4DNA (cytosine-5)-methyltransferase 3A OS=Gallus gallus OX=9031 GN=DNMT3A PE=2 SV=1
O88508DNA (cytosine-5)-methyltransferase 3A OS=Mus musculus OX=10090 GN=Dnmt3a PE=1 SV=2
Q1LZ53DNA (cytosine-5)-methyltransferase 3A OS=Rattus norvegicus OX=10116 GN=Dnmt3a PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21255ADDz_Dnmt3bDNMT3, ADD PHD zinc fingerDomainInterproscan
PF00855PWWPPWWP domainDomainInterproscan
PF17980ADD_DNMT3Cysteine rich ADD domain in DNMT3DomainInterproscan
PF00145DNA_methylaseC-5 cytosine-specific DNA methylaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR049554DomainDNMT3, ADD domain, PHD zinc fingerInterproscan
IPR000313DomainPWWP domainInterproscan
IPR018117Active_siteDNA methylase, C-5 cytosine-specific, active siteInterproscan
IPR040552DomainDNMT3, cysteine rich ADD domain, GATA1-like zinc fingerInterproscan
IPR025766DomainADD domainInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR001525FamilyC-5 cytosine methyltransferaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23068DNA CYTOSINE-5- -METHYLTRANSFERASE 3-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0008168Molecular Functionmethyltransferase activityInterproscan

Expression pattern
 Expression trend for OS493_001355-T1 global co-expression network
TOP