Detailed information of OS493_001220-T1 in Lophelia pertusa

Genomic Location: scaffold_2:6550821...6556394
NR annotation: KAJ7387872.1, Ankyrin repeat and SOCS box protein 3 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q96Q27Ankyrin repeat and SOCS box protein 2 OS=Homo sapiens OX=9606 GN=ASB2 PE=1 SV=2
Q3SX45Ankyrin repeat and SOCS box protein 2 OS=Bos taurus OX=9913 GN=ASB2 PE=2 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 adaptor Cullin RING|SOCS

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07525SOCS_boxSOCS boxDomainInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF00023AnkAnkyrin repeatRepeatInterproscan
PF13637Ank_4Ankyrin repeats (many copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001496DomainSOCS box domainInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR052391FamilyE3 Ligase Complex Components and NeurotoxinsInterproscan
IPR036036Homologous_superfamilySOCS box-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24133ANKYRIN DOMAIN-CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0035556Biological Processintracellular signal transductionInterproscan

Expression pattern
 Expression trend for OS493_001220-T1 global co-expression network
TOP