Detailed information of OS493_000839-T1 in Lophelia pertusa

Genomic Location: scaffold_2:828698...835621
NR annotation: KAJ7387508.1, hypothetical protein OS493_000839 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9NWS1PCNA-interacting partner OS=Homo sapiens OX=9606 GN=PARPBP PE=1 SV=3
F1MF21PCNA-interacting partner OS=Bos taurus OX=9913 GN=PARPBP PE=3 SV=2
Q6IRT3PCNA-interacting partner OS=Mus musculus OX=10090 GN=Parpbp PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
----------

 InterPro
InterPro termTypeDescriptionSource
IPR038932FamilyPCNA-interacting partnerInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR32121PCNA-INTERACTING PARTNERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000785Cellular ComponentchromatinInterproscan
GO:2000042Biological Processnegative regulation of double-strand break repair via homologous recombinationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K27412PARPBP; PCNA-interacting partner-DNA repair and recombination proteinsko03400deepkoala

Expression pattern
 Expression trend for OS493_000839-T1 global co-expression network
TOP