Detailed information of OS493_000837-T1 in Lophelia pertusa

Genomic Location: scaffold_2:806988...825394
NR annotation: KAJ7387507.1, Mediator of DNA damage checkpoint protein 1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q14676Mediator of DNA damage checkpoint protein 1 OS=Homo sapiens OX=9606 GN=MDC1 PE=1 SV=3
Q7YR40Mediator of DNA damage checkpoint protein 1 OS=Pan troglodytes OX=9598 GN=MDC1 PE=3 SV=1
Q767L8Mediator of DNA damage checkpoint protein 1 OS=Sus scrofa OX=9823 GN=MDC1 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16770RTT107_BRCT_5Regulator of Ty1 transposition protein 107 BRCT domainDomainInterproscan
PF16589BRCT_2BRCT domain, a BRCA1 C-terminus domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036420Homologous_superfamilyBRCT domain superfamilyInterproscan
IPR051579FamilyDNA Damage Response and Transcriptional RegulatorInterproscan
IPR001357DomainBRCT domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23196PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
----

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20780MDC1; mediator of DNA damage checkpoint protein 1-DNA repair and recombination proteinsko03400deepkoala

Expression pattern
 Expression trend for OS493_000837-T1 global co-expression network
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