Detailed information of OS493_000486-T1 in Lophelia pertusa

Genomic Location: scaffold_1:6095260...6119005
NR annotation: KAJ7394665.1, hypothetical protein OS493_000486 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING
Ubiquitin FamilyE3|E3 activity RING|U-box

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13639zf-RING_2Ring finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001841DomainZinc finger, RING-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR052639FamilyTRAIP E3 ubiquitin-protein ligaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46569E3 UBIQUITIN-PROTEIN LIGASE TRAIPInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0031297Biological Processreplication fork processingInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0090734Cellular Componentsite of DNA damageInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11985TRAIP, TRIP; TRAF-interacting proteinEC:2.3.2.27
Ubiquitin systemko04121deepkoala

Expression pattern
 Expression trend for OS493_000486-T1 global co-expression network
TOP