Detailed information of OS493_000314-T1 in Lophelia pertusa

Genomic Location: scaffold_1:3854933...3857817
NR annotation: KAJ7394500.1, SPRY domain-containing SOCS box protein 4 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A1Z6E0Protein gustavus OS=Drosophila melanogaster OX=7227 GN=gus PE=1 SV=2
Q9D5L7SPRY domain-containing SOCS box protein 1 OS=Mus musculus OX=10090 GN=Spsb1 PE=1 SV=1
Q96BD6SPRY domain-containing SOCS box protein 1 OS=Homo sapiens OX=9606 GN=SPSB1 PE=1 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 adaptor Cullin RING|SOCS

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07525SOCS_boxSOCS boxDomainInterproscan
PF00622SPRYSPRY domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001496DomainSOCS box domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR043136Homologous_superfamilyB30.2/SPRY domain superfamilyInterproscan
IPR001870DomainB30.2/SPRY domainInterproscan
IPR050672FamilyF-box/SPRY and SOCS box protein familiesInterproscan
IPR003877DomainSPRY domainInterproscan
IPR036036Homologous_superfamilySOCS box-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12245SPRY DOMAIN CONTAINING SOCS BOX PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0019005Cellular ComponentSCF ubiquitin ligase complexInterproscan
GO:0043161Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0035556Biological Processintracellular signal transductionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10343SPSB1_4, SSB1, SSB4; SPRY domain-containing SOCS box protein 1/4-Ubiquitin systemko04121deepkoala

Expression pattern
 Expression trend for OS493_000314-T1 global co-expression network
TOP