Detailed information of OS493_000228-T1 in Lophelia pertusa

Genomic Location: scaffold_1:2571779...2585026
NR annotation: KAJ7394419.1, Ubiquitin carboxyl-terminal hydrolase 16 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6PAW2Ubiquitin carboxyl-terminal hydrolase 16 OS=Xenopus laevis OX=8355 GN=usp16 PE=2 SV=1
Q99LG0Ubiquitin carboxyl-terminal hydrolase 16 OS=Mus musculus OX=10090 GN=Usp16 PE=1 SV=2
Q2KJ09Ubiquitin carboxyl-terminal hydrolase 16 OS=Rattus norvegicus OX=10116 GN=Usp16 PE=1 SV=2
 Gene family
Gene familySubfamily
Ubiquitin FamilyDUB|USP|USP
Ubiquitin FamilyUBD|ZnF|ZnF_UBP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00443UCHUbiquitin carboxyl-terminal hydrolaseFamilyInterproscan
PF02148zf-UBPZn-finger in ubiquitin-hydrolases and other proteinDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018200Conserved_siteUbiquitin specific protease, conserved siteInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR050185FamilyUbiquitin carboxyl-terminal hydrolaseInterproscan
IPR001394DomainPeptidase C19, ubiquitin carboxyl-terminal hydrolaseInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR001607DomainZinc finger, UBP-typeInterproscan
IPR028889DomainUbiquitin specific protease domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21646UBIQUITIN CARBOXYL-TERMINAL HYDROLASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004843Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0016579Biological Processprotein deubiquitinationInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11844USP16_45; ubiquitin carboxyl-terminal hydrolase 16/45EC:3.4.19.12
Ubiquitin systemko04121deepkoala

Expression pattern
 Expression trend for OS493_000228-T1 global co-expression network
TOP