Detailed information of OS493_000196-T1 in Lophelia pertusa

Genomic Location: scaffold_1:2189520...2191706
NR annotation: KAJ7394387.1, Cullin-5 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q93034Cullin-5 OS=Homo sapiens OX=9606 GN=CUL5 PE=1 SV=4
Q5RB36Cullin-5 OS=Pongo abelii OX=9601 GN=CUL5 PE=2 SV=3
Q9JJ31Cullin-5 OS=Rattus norvegicus OX=10116 GN=Cul5 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10557Cullin_Nedd8Cullin protein neddylation domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR019559DomainCullin protein, neddylation domainInterproscan
IPR045093FamilyCullinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11932CULLINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0019005Cellular ComponentSCF ubiquitin ligase complexInterproscan
GO:0030674Molecular Functionprotein-macromolecule adaptor activityInterproscan
GO:0031146Biological ProcessSCF-dependent proteasomal ubiquitin-dependent protein catabolic processInterproscan
GO:0031461Cellular Componentcullin-RING ubiquitin ligase complexInterproscan
GO:0031466Cellular ComponentCul5-RING ubiquitin ligase complexInterproscan
GO:0031625Molecular Functionubiquitin protein ligase bindingInterproscan

Expression pattern
 Expression trend for OS493_000196-T1 global co-expression network
TOP