Detailed information of OS493_000196-T1 in Lophelia pertusa Gene info
Gene IDAnnotationScaffoldStartEndStrand
OS493_000196-T1CULLINscaffold_121895202191706-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10557Cullin_Nedd8Cullin protein neddylation domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR019559DomainCullin protein, neddylation domainInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR045093FamilyCullinInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11932CULLINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0019005Cellular ComponentSCF ubiquitin ligase complexInterproscan
GO:0030674Molecular Functionprotein-macromolecule adaptor activityInterproscan
GO:0031146Biological ProcessSCF-dependent proteasomal ubiquitin-dependent protein catabolic processInterproscan
GO:0031461Cellular Componentcullin-RING ubiquitin ligase complexInterproscan
GO:0031466Cellular ComponentCul5-RING ubiquitin ligase complexInterproscan
GO:0031625Molecular Functionubiquitin protein ligase bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for OS493_000196-T1 global RNA-seq network
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