| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| OS493_000086-T1 | N4BP1-RELATED | scaffold_1 | 1016295 | 1020368 | + |
| CDS | |||||
| OS493_000086-T1 | |||||
| Transcript |
| OS493_000086-T1 |
| Protein |
| OS493_000086-T1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF11977 | RNase_Zc3h12a | Zc3h12a-like Ribonuclease NYN domain | Domain | Interproscan |
| PF18039 | UBA_6 | UBA-like domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000571 | Domain | Zinc finger, CCCH-type | Interproscan |
| IPR021869 | Domain | Ribonuclease Zc3h12a-like, NYN domain | Interproscan |
| IPR040546 | Domain | Rege-1, UBA-like domain | Interproscan |
| IPR051101 | Family | ZC3H12/N4BP1 Ribonuclease and Regulator | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12876 | N4BP1-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003729 | Molecular Function | mRNA binding | Interproscan |
| GO:0004521 | Molecular Function | RNA endonuclease activity | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0036464 | Cellular Component | cytoplasmic ribonucleoprotein granule | Interproscan |
| GO:0046872 | Molecular Function | metal ion binding | Interproscan |
| GO:0090502 | Biological Process | obsolete RNA phosphodiester bond hydrolysis, endonucleolytic | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for OS493_000086-T1 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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