Detailed information of OS493_000046-T1 in Lophelia pertusa

Genomic Location: scaffold_1:487073...503190
NR annotation: KAJ7394244.1, Intraflagellar transport protein 88 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q61371Intraflagellar transport protein 88 homolog OS=Mus musculus OX=10090 GN=Ift88 PE=1 SV=2
Q13099Intraflagellar transport protein 88 homolog OS=Homo sapiens OX=9606 GN=IFT88 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12895ANAPC3Anaphase-promoting complex, cyclosome, subunit 3RepeatInterproscan
PF13424TPR_12Tetratricopeptide repeatRepeatInterproscan
PF13181TPR_8Tetratricopeptide repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44117INTRAFLAGELLAR TRANSPORT PROTEIN 88 HOMOLOGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005814Cellular ComponentcentrioleInterproscan
GO:0019894Molecular Functionkinesin bindingInterproscan
GO:0036064Cellular Componentciliary basal bodyInterproscan
GO:0042073Biological Processintraciliary transportInterproscan
GO:0097546Cellular Componentciliary baseInterproscan
GO:0097730Cellular Componentnon-motile ciliumInterproscan
GO:1905515Biological Processnon-motile cilium assemblyInterproscan

Expression pattern
 Expression trend for OS493_000046-T1 global co-expression network
TOP