Gene detail

Detailed information of OFRAG00000015054.1 in Osedax frankpressi Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
OFRAG00000015054.1	BETA-1,4-GALACTOSYLTRANSFERASE	tig00006789	34293	60263	+

Gene Structure

More details in Jbrowse Sequence

CDS

OFRAG00000015054.1

ATGAATCGCTCATTTTTGAAACTTGCTGTAGCTCTGTTAATTATAATCTTAACGTTACACCTGCTATTTTATGAAATCTATGACTGTAAGTGTTCCAAAGGAAAACTTCAAGATTTAGAAATATCTACCAATATACCTACTATGAAAATTCATCGCAGTTATGATGAGAAGTGCTGGGTCCCCAGACCATACCTGGATAACCTCTGCAAATGTTATCCGGAAGGATTGGTTGGATTGGAATCAAAATTGAATACACTAGCAGGCGGAATTACATCTTTTGAGATATCCAACACTCCGAATCTTAGACAACCAAAGAATTGTACTTCCAGACAAGAGATAGTCATTATAATTCCATATAGGGATCGACTCTCACATTTAAAGATATTCCTGAAAAGATTGACAACTGTTCTTGATAGACAACATACTTCTTACCGGATATTAGTCGTTGAACAGAATTTGCCGTTGGTATTCAACAAGGCCATGGTAATGAACTCTGGCTTCATTTTCTCCGCTAGAAGATGGCCCCACACGGACTGTTTTATATTTCACGACGTAGATTTGCTTCCGGAGAATGATCACAACCTTTATAGCTGTCGAGAATCTTCAATGCTTCACCTTGCACCCTATGTGAATACGCTAAACTATAATTTTTTCTATGAAGATTTATTGGGTGGAGCTACAGCGTTTACCAGTAACCAATTCCGGTTGGCTAACGGATTCACCAACACCATATACGGCTGGGGAGCTGAAGATGACGATCTGGCTTCAAGGTTAAAGGCCGTATCTCTGAATATATTCAGGGAAAACAAAACGGTGGGAAGGTATACTATGATAAGACATAACAAGGACCACAGTAATCCTCATCTCATACGAAATATAACCCGATATCGTAATAAAGAACATGTTGATGTCGAAGGACTAAACACGGTGAAGTTTGAAGTTGCTAATCTCACCGAATACGATTTCTTTACAAAGATTGAAATTAACATACCAGAAATGCCTAAAAAGGACATGAAGAAATTTAAACAAATACTCCCGCAGAAAGAAATTCTGGCCTTTGTGAAGAATTCATATTCTATTGTAGACCTCAGAGTGAAATTCACTGTATTAATTCCTTCTGCCATATCGTCACTTATGTCGTTGTATTTCGTTATTTTCCTGTATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATACACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATAAACTTACAGATCATATATACTTCCAATTTATGTAG

Transcript

OFRAG00000015054.1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02709	Glyco_transf_7C	N-terminal domain of galactosyltransferase	Family	Interproscan
PF04286	DUF445	Protein of unknown function (DUF445)	Family	Interproscan
PF13733	Glyco_transf_7N	N-terminal region of glycosyl transferase group 7	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003859	Family	Beta-1,4-galactosyltransferase	Interproscan
IPR007383	Family	Protein of unknown function DUF445	Interproscan
IPR011989	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR027791	Domain	Galactosyltransferase, C-terminal	Interproscan
IPR027995	Domain	Galactosyltransferase, N-terminal	Interproscan
IPR029044	Homologous_superfamily	Nucleotide-diphospho-sugar transferases	Interproscan
IPR033133	Domain	Pumilio homology domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19300	BETA-1,4-GALACTOSYLTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0005794	Cellular Component	Golgi apparatus	Interproscan
GO:0005975	Biological Process	carbohydrate metabolic process	Interproscan
GO:0008378	Molecular Function	galactosyltransferase activity	Interproscan
GO:0016757	Molecular Function	glycosyltransferase activity	Interproscan
GO:0070085	Biological Process	glycosylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-