Gene detail

Detailed information of OFRAG00000013978.1 in Osedax frankpressi Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
OFRAG00000013978.1	GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD	tig00004115	40378	70899	-

Gene Structure

More details in Jbrowse Sequence

CDS

OFRAG00000013978.1

ATGTCCCGAATAATAATTAAAAACCTTCCATCAAATATCAAAGAAGAATTGTTGCGTACAAAATGTGAATCAATTGGTACAGTAACTGATTGTTCTTTAAAATATGGTCCCGATGGAAAATTCAGGAAATTTGCTTTCGTGGGATTTAAGCTCACCGATGAAGCGAAGAAAGCTGTGAAAGACCTCAACAGAACTTATATTAATACGTCGCGATTAACGGTTGAACTATGTAGAGATTTTGGCGATAGCAATAAACCAAGAGCTTGGAGTAAATATAGTAAAGATAGTTCAGCTTTTTCTTTAAATATTAATAATAATAAAGAGAAATCTAGTGATGATTTAAAACCAAAAAAGGAACAATCCAAAGAAAATAACCCTCTAGGCGAATTGGAAGATGATCCAGGATTTAGAGAGTTTGTGGATGTCCATAAAAATCGTTCTTTGAAATCTACGTGGAGTAACGATGATCAATTAGGACGAGATGTTGACAATAAAAAATCGAAAGACGTTAATAATAGTACTGAAATAAGAAAATCCAAAAAAGACAAGAAATTGGAAAAGATTATAAATTCCGTTTCTGATTTAGATTATTTGAAAACCAAAGTTAAAAAAGGAGATGAAACCGATGAAAGTGGAGAAGAAATTTCAATTAAAGTAGAAAAGAAAATAAAAAAAGAAATAAAGTCTGAAAGTGACGATGATGTATCGAGTGAGAGTGACAATTGTTCAAGGAAAATTAAAAAAGAAGATATGAAATTTGTAAAGGATGTAAAAAAAGATAAAACCAAACTAAAAAAACTTAAAAAAATAAAAGTTAAAAAGGAAGAACTCAGCGATGGTGAAAATTCAGAATCTGAAAGTGAAGAAAGTTCATCATCATCTTCTAGTAGTGAAAGTGAAGTAGAAGAAGATGTAAAGCCTCATATTAAAATGGAATCGGAGAAAGATTTGAAATTCATCTTAAATATGAAAGGTGTTCCATCGTCCGCAAGCTTGGAAACAATAAAGAATTTCTTTAAACCAATAACGATAAAGAAAATTACAAGGAGCGGAATTAAAAAGAACATTTCTGCAGGTATTACTCAAATTGAATTTTGCTCGGAGAAGGATTGGAATTCCGCCATGCGAAGAAACAAGAATTTTATCAATTCTACGAAAATTTATTTATTCAAATTCAAAGAAGAAAGTAAAGAGAAGATCTTTGCCAAACAAGAAACCATTAAAGAATGGTGCAACAAGAAAGCCGAGGGGAAGGAGCGCACGGGACAATCGGTTAATGCAAATGAAAAGGAGTCGATAGCAGAGTCTGGCAGGATATTTATACGCAATTTAGCATATTGCTGTAAAGAAGAAGATATTGAGAAGATATTTTCGAAATACGGTCCCCTCACAGAAACACTTCTCCCTCTCGATAAGTTTACCCGGAAGATCAAGGGATTCGCCTTCGTGACGTTTATGCTGCCGCAGAACGCTCACAAGGCCTTCACGGAACTCGACGGCACCAGTTTCATGGGTCGTATGTTGCATTTGATTCCGGCGGAGCCCAAAAAGGAAGACAGCATCATTGTTACAGACGAAACCTCCTTCAAAAAGAAGAAAGAAATGGAGTTAAAGGCATCTGCCACAAGCTCTCACAACTGGAATACCTTGTTCCTCGGACAGAATGCCGTTGCAGATTTAATGGCGGATAAATACGGGACAAGCAAGAGTGAAATACTTTCAACGGAAGGAGGTAGTAGTGCCGGGGTACGATTAGCATTGGGAGAAACCCAAATCATCGCTGAAACTCGAGAATTCCTCATCAAGGAAGGCATAGCGCTTGACTCCTTCAGTCAGGCGGCAGGTGAAAGGAGTAAGACCTGCCTGTTGGTTAAGAACCTCCCCGCCGATACAACTCGTCAGGAGTTACTCGATCTTTTCACTCCGTCGGGTCGACTTGGTCGCCTTGTGCTGCCCTCTAGCGGAGTCACGGCCGTAGTAGAGTTTCAAGAACCGACGGAGGCGAGGTCGGCCTTCCGAAGTCTGGCCTACACCAAGTTTAAGTATATTCCGCTGTATCTGGAGTGGGCCCCTGTGAATGTTTTCGCAAAATCTCTAGAATCTTCTAAGAAAATAAATGTAGAAGGAAATGATGATCAGACTTCCTCATCCTCATCATCGGAGAGTGAAGATGAAGCTGTTCCTGATAGCACTCTGTTTGTTAAAAATCTCAACTTCGATACCACAGAGGAAACACTCTCCAAGATATTCGCCAAATGTGGAAAACTTAAAGCAATTACTATTTCAACAAAACAAGATTCTAAAAATCCAGGAAACAAACTTTCGATGGGCTACGGCTTTATCCAATATAAAACCGCTTCCGATGCTAAAACTGCTATGAAACGCCTTCAACACAAGGACATCGAAGGACATGTCATTGAGTTGAAGATCTCGAACAGGGCGACGTTGCAAACCACGAAAACTTCTCGGCGTAAACAAGATACCGCCAAGAAACAGCGCAGCAACAAAATTCTCATCCGCAATATTCCCTTCGAGGCCAAGAGCAAAGAGTTGAAACAGATTTTCAGTGTTTTCGGTGAGTTGAAGTCGATGCGTTTACCAAAGAAATTAAGCGGAACAGGAAATCATCGCGGTTTCGCCTTTGCACAATTCGAGTCTAAAAAAGATGCTAAGAGAGCATTCGATGCATTGTGCCACAGTACACATTTGTACGGGCGCCGCCTGGTGTTGGAATGGGCCGATGAAGTCGAAGATATCGAAGAACTCAGGAAAAAAACTGCAGAACATTTCCACGAAGGAGAACCAGCAAATAAGAATTCATCATTAAATATATCCAAACCCAATACTCCGTTAAAACCTGGAATGCCTAAAGAAAATCAACCCCTTCGTTCCAGGTCTATTACAATTTCTACTAATGCTAGAGAGGAAATACCGTCCGATCAATTGGTTGATATCGAGGAACGTGCCCTAGAGTTGTTGAAGAGTACACTGATAGAAGAACAGACGACAACTGTTCCTCATGTCTTTGTTATCCTTGGAGCCTCTGGAGATTTAGCAAGGAAAAAGATATACCCGACTCTATGGTCTCTATTCCGTGATGGGCTATTGCCTCAGACTACATACTTTATTGGATACGCTCGTAGTAAGATCACTGTAGTCGATATCTTCTCGAAAGCTCGTCCTTATCTCAAGATACGGGATTCCGATGAGGATAAATTTGAAGATTTCATTTCCGTAAATCGATACGTATCTGGGTCCTACGATGACCCTGAAGGATTTGAAGCTTTGGATAAGAAGATTTGTCGACTAGAGAATTTAGGCCAGGCCAATCGACTTTTCTATTTAGCTCTACCACCCAGTGTGTATGAGTCTGTGACATCGATGATTAAACTAAATTGTATGGCAAAACACAGCGATTCATGGTCTCGTATTATTGTCGAAAAGCCATTTGGTCGCGACCTTGAGAGTTCAGCGAATTTGACACGCCACCTGGCAACTCTGTTCAGTGAGGACCAGATCTACCGAATTGACCACTACCTGGGCAAAGAGATGGTGCAGAACCTCATGGTACTTAGGTTTGCAAATCAGATGTTTAGTCGCATTTGGAACCGAGACAACATAGCCTCTATTGTTATTACCTTCAAGGAACCGTTTGGTACTCAAGGTCGTGGGGGATACTTTGACGCCTTTGGCATTATCAGGGATATAATGCAGAATCATTTACTTCAAATTCTAACTCTGGTGGCAATGGAAAAACCTATTTCCACCTCTCCAGAGGATATTAGAAATGAAAAGGTGAAGGTATTACGTTGTATACCGGAAGTTTTACTAGAGAATGTTGTTTTGGGTCAGTACATCGGTGATCCAGACGCCAGTCCTGAAGATGATGCCAGTAAAGGCTATCTGGATGATCCCACTGTTCCGAAAGGTTCAAAGACGGCTACTTTTGCTGAAGCTGCTTTATTTATTAATAATGAACGATGGGAAGGAGTTCCATTTTTGCTGCGTTGCGGAAAGGCATTGAATGAACGCAAGGCTGAAGTGAGAATTCAATTCCGTGACGTGCCTGGAAATATTTTCCATTCGGACGCAATACGCCGAAATGAATTAGTAATCCGAGTGCAACCTAATGAAGCAATCTACATGAAAATGGCCAACAAACGGCCTGGGATGACTTTTGGGGTCGACGAAACAGAACTCGACCTCACTTATGGGTCACGTTACAAGGGTATCCGCATGCCCGACGCCTACGAACGGCTAATTCTTGATGTCTTCACTGGTACGCAAATCAACTTCGTGAGGTCGGATGAACTCGCCGAAGCTTGGCGCGTTCTCACTCCGCTATTGCAGCAGATTGACCGGGAACAACCTACCCCTGTGCCCTACATTTACGGCAGCCGATGCCCCTACGAAGCAGACCTACTGAGGGCTAGAAATAACTTTATCTATTCGGGTACATACCGCTGGAATGCTCCCTCTCGACAAGCTTCTGTAATGTCATCACACCACAAATTTTGA

Transcript

OFRAG00000013978.1

ATATATTATAATAATTTTTTACTATACTTTACGATGTCCCGAATAATAATTAAAAACCTTCCATCAAATATCAAAGAAGAATTGTTGCGTACAAAATGTGAATCAATTGGTACAGTAACTGATTGTTCTTTAAAATATGGTCCCGATGGAAAATTCAGGAAATTTGCTTTCGTGGGATTTAAGCTCACCGATGAAGCGAAGAAAGCTGTGAAAGACCTCAACAGAACTTATATTAATACGTCGCGATTAACGGTTGAACTATGTAGAGATTTTGGCGATAGCAATAAACCAAGAGCTTGGAGTAAATATAGTAAAGATAGTTCAGCTTTTTCTTTAAATATTAATAATAATAAAGAGAAATCTAGTGATGATTTAAAACCAAAAAAGGAACAATCCAAAGAAAATAACCCTCTAGGCGAATTGGAAGATGATCCAGGATTTAGAGAGTTTGTGGATGTCCATAAAAATCGTTCTTTGAAATCTACGTGGAGTAACGATGATCAATTAGGACGAGATGTTGACAATAAAAAATCGAAAGACGTTAATAATAGTACTGAAATAAGAAAATCCAAAAAAGACAAGAAATTGGAAAAGATTATAAATTCCGTTTCTGATTTAGATTATTTGAAAACCAAAGTTAAAAAAGGAGATGAAACCGATGAAAGTGGAGAAGAAATTTCAATTAAAGTAGAAAAGAAAATAAAAAAAGAAATAAAGTCTGAAAGTGACGATGATGTATCGAGTGAGAGTGACAATTGTTCAAGGAAAATTAAAAAAGAAGATATGAAATTTGTAAAGGATGTAAAAAAAGATAAAACCAAACTAAAAAAACTTAAAAAAATAAAAGTTAAAAAGGAAGAACTCAGCGATGGTGAAAATTCAGAATCTGAAAGTGAAGAAAGTTCATCATCATCTTCTAGTAGTGAAAGTGAAGTAGAAGAAGATGTAAAGCCTCATATTAAAATGGAATCGGAGAAAGATTTGAAATTCATCTTAAATATGAAAGGTGTTCCATCGTCCGCAAGCTTGGAAACAATAAAGAATTTCTTTAAACCAATAACGATAAAGAAAATTACAAGGAGCGGAATTAAAAAGAACATTTCTGCAGGTATTACTCAAATTGAATTTTGCTCGGAGAAGGATTGGAATTCCGCCATGCGAAGAAACAAGAATTTTATCAATTCTACGAAAATTTATTTATTCAAATTCAAAGAAGAAAGTAAAGAGAAGATCTTTGCCAAACAAGAAACCATTAAAGAATGGTGCAACAAGAAAGCCGAGGGGAAGGAGCGCACGGGACAATCGGTTAATGCAAATGAAAAGGAGTCGATAGCAGAGTCTGGCAGGATATTTATACGCAATTTAGCATATTGCTGTAAAGAAGAAGATATTGAGAAGATATTTTCGAAATACGGTCCCCTCACAGAAACACTTCTCCCTCTCGATAAGTTTACCCGGAAGATCAAGGGATTCGCCTTCGTGACGTTTATGCTGCCGCAGAACGCTCACAAGGCCTTCACGGAACTCGACGGCACCAGTTTCATGGGTCGTATGTTGCATTTGATTCCGGCGGAGCCCAAAAAGGAAGACAGCATCATTGTTACAGACGAAACCTCCTTCAAAAAGAAGAAAGAAATGGAGTTAAAGGCATCTGCCACAAGCTCTCACAACTGGAATACCTTGTTCCTCGGACAGAATGCCGTTGCAGATTTAATGGCGGATAAATACGGGACAAGCAAGAGTGAAATACTTTCAACGGAAGGAGGTAGTAGTGCCGGGGTACGATTAGCATTGGGAGAAACCCAAATCATCGCTGAAACTCGAGAATTCCTCATCAAGGAAGGCATAGCGCTTGACTCCTTCAGTCAGGCGGCAGGTGAAAGGAGTAAGACCTGCCTGTTGGTTAAGAACCTCCCCGCCGATACAACTCGTCAGGAGTTACTCGATCTTTTCACTCCGTCGGGTCGACTTGGTCGCCTTGTGCTGCCCTCTAGCGGAGTCACGGCCGTAGTAGAGTTTCAAGAACCGACGGAGGCGAGGTCGGCCTTCCGAAGTCTGGCCTACACCAAGTTTAAGTATATTCCGCTGTATCTGGAGTGGGCCCCTGTGAATGTTTTCGCAAAATCTCTAGAATCTTCTAAGAAAATAAATGTAGAAGGAAATGATGATCAGACTTCCTCATCCTCATCATCGGAGAGTGAAGATGAAGCTGTTCCTGATAGCACTCTGTTTGTTAAAAATCTCAACTTCGATACCACAGAGGAAACACTCTCCAAGATATTCGCCAAATGTGGAAAACTTAAAGCAATTACTATTTCAACAAAACAAGATTCTAAAAATCCAGGAAACAAACTTTCGATGGGCTACGGCTTTATCCAATATAAAACCGCTTCCGATGCTAAAACTGCTATGAAACGCCTTCAACACAAGGACATCGAAGGACATGTCATTGAGTTGAAGATCTCGAACAGGGCGACGTTGCAAACCACGAAAACTTCTCGGCGTAAACAAGATACCGCCAAGAAACAGCGCAGCAACAAAATTCTCATCCGCAATATTCCCTTCGAGGCCAAGAGCAAAGAGTTGAAACAGATTTTCAGTGTTTTCGGTGAGTTGAAGTCGATGCGTTTACCAAAGAAATTAAGCGGAACAGGAAATCATCGCGGTTTCGCCTTTGCACAATTCGAGTCTAAAAAAGATGCTAAGAGAGCATTCGATGCATTGTGCCACAGTACACATTTGTACGGGCGCCGCCTGGTGTTGGAATGGGCCGATGAAGTCGAAGATATCGAAGAACTCAGGAAAAAAACTGCAGAACATTTCCACGAAGGAGAACCAGCAAATAAGAATTCATCATTAAATATATCCAAACCCAATACTCCGTTAAAACCTGGAATGCCTAAAGAAAATCAACCCCTTCGTTCCAGGTCTATTACAATTTCTACTAATGCTAGAGAGGAAATACCGTCCGATCAATTGGTTGATATCGAGGAACGTGCCCTAGAGTTGTTGAAGAGTACACTGATAGAAGAACAGACGACAACTGTTCCTCATGTCTTTGTTATCCTTGGAGCCTCTGGAGATTTAGCAAGGAAAAAGATATACCCGACTCTATGGTCTCTATTCCGTGATGGGCTATTGCCTCAGACTACATACTTTATTGGATACGCTCGTAGTAAGATCACTGTAGTCGATATCTTCTCGAAAGCTCGTCCTTATCTCAAGATACGGGATTCCGATGAGGATAAATTTGAAGATTTCATTTCCGTAAATCGATACGTATCTGGGTCCTACGATGACCCTGAAGGATTTGAAGCTTTGGATAAGAAGATTTGTCGACTAGAGAATTTAGGCCAGGCCAATCGACTTTTCTATTTAGCTCTACCACCCAGTGTGTATGAGTCTGTGACATCGATGATTAAACTAAATTGTATGGCAAAACACAGCGATTCATGGTCTCGTATTATTGTCGAAAAGCCATTTGGTCGCGACCTTGAGAGTTCAGCGAATTTGACACGCCACCTGGCAACTCTGTTCAGTGAGGACCAGATCTACCGAATTGACCACTACCTGGGCAAAGAGATGGTGCAGAACCTCATGGTACTTAGGTTTGCAAATCAGATGTTTAGTCGCATTTGGAACCGAGACAACATAGCCTCTATTGTTATTACCTTCAAGGAACCGTTTGGTACTCAAGGTCGTGGGGGATACTTTGACGCCTTTGGCATTATCAGGGATATAATGCAGAATCATTTACTTCAAATTCTAACTCTGGTGGCAATGGAAAAACCTATTTCCACCTCTCCAGAGGATATTAGAAATGAAAAGGTGAAGGTATTACGTTGTATACCGGAAGTTTTACTAGAGAATGTTGTTTTGGGTCAGTACATCGGTGATCCAGACGCCAGTCCTGAAGATGATGCCAGTAAAGGCTATCTGGATGATCCCACTGTTCCGAAAGGTTCAAAGACGGCTACTTTTGCTGAAGCTGCTTTATTTATTAATAATGAACGATGGGAAGGAGTTCCATTTTTGCTGCGTTGCGGAAAGGCATTGAATGAACGCAAGGCTGAAGTGAGAATTCAATTCCGTGACGTGCCTGGAAATATTTTCCATTCGGACGCAATACGCCGAAATGAATTAGTAATCCGAGTGCAACCTAATGAAGCAATCTACATGAAAATGGCCAACAAACGGCCTGGGATGACTTTTGGGGTCGACGAAACAGAACTCGACCTCACTTATGGGTCACGTTACAAGGGTATCCGCATGCCCGACGCCTACGAACGGCTAATTCTTGATGTCTTCACTGGTACGCAAATCAACTTCGTGAGGTCGGATGAACTCGCCGAAGCTTGGCGCGTTCTCACTCCGCTATTGCAGCAGATTGACCGGGAACAACCTACCCCTGTGCCCTACATTTACGGCAGCCGATGCCCCTACGAAGCAGACCTACTGAGGGCTAGAAATAACTTTATCTATTCGGGTACATACCGCTGGAATGCTCCCTCTCGACAAGCTTCTGTAATGTCATCACACCACAAATTTTGA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan
PF00479	G6PD_N	Glucose-6-phosphate dehydrogenase, NAD binding domain	Domain	Interproscan
PF02781	G6PD_C	Glucose-6-phosphate dehydrogenase, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR001282	Family	Glucose-6-phosphate dehydrogenase	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR019796	Active_site	Glucose-6-phosphate dehydrogenase, active site	Interproscan
IPR022674	Domain	Glucose-6-phosphate dehydrogenase, NAD-binding	Interproscan
IPR022675	Domain	Glucose-6-phosphate dehydrogenase, C-terminal	Interproscan
IPR034421	Domain	Probable RNA-binding protein 19, RNA recognition motif 6	Interproscan
IPR034423	Domain	Probable RNA-binding protein 19, RNA recognition motif 5	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23429	GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0004345	Molecular Function	glucose-6-phosphate dehydrogenase activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006006	Biological Process	glucose metabolic process	Interproscan
GO:0009051	Biological Process	pentose-phosphate shunt, oxidative branch	Interproscan
GO:0016614	Molecular Function	oxidoreductase activity, acting on CH-OH group of donors	Interproscan
GO:0050661	Molecular Function	NADP binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-