Gene detail

Detailed information of OFRAG00000012863.1 in Osedax frankpressi Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
OFRAG00000012863.1	STG PROTEIN	tig00003105	94290	96727	-

Gene Structure

More details in Jbrowse Sequence

CDS

OFRAG00000012863.1

ATGAGGATGTCGAATGAATATAATAGAGTTAACGACTTCGCTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACACATTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAGCTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACACATTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAGCTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACACATTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAATTAAGGACAAGCTACGGACAAGCTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACACATTACGGATAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACACATTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACACATTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACACATTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACACATTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACACATTACGGACAAACTACGGACAAACTACGGACAAACTATGGACAAATTCGGACAAGCTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAAATCGGACAAGCTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAAATCGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAATCTACGGACACATTACGGACAAATTACGGACAAGCTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAAATCGGACAAACTACGGACAAACTACGGACAATCTACGGACACATTACGGACACATTACGGACAAGCTACGGACAAACTACGGACAAACTACGGACAATCTACGGACACATTACGGACAAATTACGGACAAGCTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGACAAACTACGGAAAGAATCGCAACCGATTTGA

Transcript

OFRAG00000012863.1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01442	Apolipoprotein	Apolipoprotein A1/A4/E domain	Domain	Interproscan
PF07709	SRR	Seven Residue Repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000074	Family	Apolipoprotein A/E	Interproscan
IPR011714	Repeat	Seven residue repeat	Interproscan
IPR023198	Homologous_superfamily	Phosphoglycolate phosphatase-like, domain 2	Interproscan
IPR026135	Family	Uncharacterised protein C6orf15	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15817	STG PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005576	Cellular Component	extracellular region	Interproscan
GO:0006869	Biological Process	lipid transport	Interproscan
GO:0008289	Molecular Function	lipid binding	Interproscan
GO:0030198	Biological Process	extracellular matrix organization	Interproscan
GO:0031012	Cellular Component	extracellular matrix	Interproscan
GO:0042157	Biological Process	lipoprotein metabolic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-