Gene detail

Detailed information of OFRAG00000010054.1 in Osedax frankpressi Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
OFRAG00000010054.1	ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED	tig00001825	113709	139991	+

Gene Structure

More details in Jbrowse Sequence

CDS

OFRAG00000010054.1

ATGATTAACGTCATATACTATCTAAACAGCGGTTCGACCAAAGGCTATTGTTATATAAGGTTCCAGAGTCAAGATGCAGCCGTGCGATGTATCGACCACCTCGACAATTACGAACTACGGGCAAACATCAGACTCGTGGTTCAAAGGTCGAACGATAATCGTCGCCTACGACTTACGAACTTACCGGCCGACTTGAACCGTTACGACGCCTCTCTGCTGGGACTACTGCACAGATTGACCGACTGCGTGTCCTACGAAGTGCTGACGCCTCTCCAGAACGGCCGCAACGCCTCGGTGGTCATCGAGTTCGGTAGTCACGAGGCCGCCTCGTCGGCCAGACGTTACGTCATGACTTCTGATATCTACGTGGCGAGCAGATCCGTCGGAGTCGAGTGGGAAAATCCGAACTCGCAGAATGGTGTTTTAGTTAATAAAGTGAGAACCCTCTACGTAGGCAATATGACAATGAATATTGAAGCCAGACAATTGGCCGAGTATTTCGAGCAGTTTACCGGTATACATAACTGCGTGGAGAACTGTACAGTGTATAACGGCTGCGCTTTCGTCAAATTCTACACCAGAGCTTTTGCGATGCATTGCCATAGTAAGATTCCAGTCCTATTCACGGTGCTCGTCGTTTGCGCTACCGTCCCGTTAGCCACCCACTACGCCGAGAGTCTGCGTTGCCCTGCCGGCGGTTGCGAGAAAGTCGGAGCCGTTGAACTCCCCGCTCCGGCCGACGAGTCCTTGCAACGCGCCAACGCCGACGAACTCCTCCCGCCGAGGCACAAGCAACGAGGACAACTTCTCGCCGCCGCCAGGGACATCGTAGCGGGCGTCGATATCAACAGCACGCTCTTCGACGTCGATCTGATCAAACGGATGCTCGACGTCAACGATACTCTAGCGGTACGTAATGCGTCCGAGTTCGCGGTACCGCTATCCGCCGAGTACTGGAAGTCCTTGGGCTACGACGATATGATAGACGAGGATTTCGCGTACTCCTATAACCGCAAGGTTTACGAAGATAATTTGATAAACGAAAATGTGAAGCCATGCGACGATTTCTACAAATATGCTTGCGGTTCTGCACCACCCAGACGTGCCGCTGAGATGAAACATAAAATAAAGTACTGGGAGTACATGATGAAAGATGCGATGAACGAATCCCTCGGCTTCAATTTCACCGGCTACAAACAATTCCGAGATTTCTATTTATCCTGCAACCGAGTTGACGAAGAAGATTCCGAGTTGTCCGATGACCAATTGGTCGAGACTATAAATTTGCTGGGAGGATGGCATATCCAGGAGGTAAATAAAACTAAAAGAGAAACCGCATGTTGGAGAAGTGCTAGAAAATCGTTTCCGGTTGTTTCGTCTAGGGTATTTTCTCACATCTTGAAAATGAGTACGTTTCCAAAGTTCTATCCGGAATCGTGGTATAAGTCTCAAGACATTGCCGGCTTACTTCAGCAGAAAATCATCGCCAACGTTGAGAACTCGCATTGGATGGATCCGCATAAGGCGAAAGGAATTGTTGATCTGTACACACATCTCGAGTTCATGAACACCTATGATAACTTGGACACCGTGTTGGCTACGGAGAATGAAACTATGAAAAACGTTCCCCTTTACGATCACAACAAAACATTGTTCGCCAACATCATGATTATGAAACCAATTACAATAAGAAATATGAACTACATTTACGCGTATACAGATAATCTTATCAGCACTGGCTTCCAAGTCAAGGGAGCTAGTGTAGTTAATAATTTCAATGTTATGACAGATAGATTCAAAATCATATTTAATCAGGGACTACTCGGCTTTCCTATATATGAACCTAAATTCAATTACAAGTTTTTGCATTACGGAATATTAGGGTCCTATCTAGGCCACGAATATACTCACCACACTGGATTGGACGAGCATATGGCCATGATCGCTTCCGGTCAGACGAGTACCTTCAACTCGACATACGTACAAGAGTTCATCGACTGTCTGACTGACCACTACTCCAAGTACACGTATGGCGGGATAAAGGTAGACGGCGATATTACATTTTTAGAAAATATCGCTGACGTAATTGGTATAATGATGTCCTACGAGATCTACCAATCTGTTGAAGCGGAATCACCATCCGATAAGTTACTCGGACACGATAAATCTAAAGACGAGCATTTCTTCTTAGCATACGCACAGAGCATGTGCGAAGGAGTGCAATACACCAAAGACAATTGGCAGTTGTTCAACACGTCCTCGCACGCTCCCGACCCAGTAAGAGTTAACGGTGCCTTATCGCAGAACCGTTATTTCCACGAAACCTACAAATGTCCCATCGGATCGCCAATGCGACCCGAGCAATGCAAACCTCTATTCTAG

Transcript

OFRAG00000010054.1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan
PF01431	Peptidase_M13	Peptidase family M13	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR000718	Family	Peptidase M13	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR018497	Domain	Peptidase M13, C-terminal domain	Interproscan
IPR024079	Homologous_superfamily	Metallopeptidase, catalytic domain superfamily	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR042089	Homologous_superfamily	Peptidase M13, domain 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11733	ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0004222	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0008237	Molecular Function	metallopeptidase activity	Interproscan
GO:0016485	Biological Process	protein processing	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-