Detailed information of OFRAG00000004560.1 in Osedax frankpressi Gene info
Gene IDAnnotationScaffoldStartEndStrand
OFRAG00000004560.1VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13tig00000685200200271059-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00122E1-E2_ATPaseE1-E2 ATPaseFamilyInterproscan
PF06650VPS13_VABVacuolar-sorting associated protein 13, adaptor binding domainDomainInterproscan
PF12624Chorein_NVPS13-like, N-terminalDomainInterproscan
PF13246Cation_ATPaseCation transport ATPase (P-type)FamilyInterproscan
PF16908VPS13_ext_choreinVacuolar sorting-associated protein 13, extended-choreinRepeatInterproscan
PF16909VPS13_DH-likeVacuolar-sorting-associated 13 protein, DH-like domainFamilyInterproscan
PF16910VPS13_mid_rptVPS13, central RBG modulesRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001757FamilyP-type ATPaseInterproscan
IPR006544FamilyP-type ATPase, subfamily VInterproscan
IPR008250Homologous_superfamilyP-type ATPase, A domain superfamilyInterproscan
IPR009543DomainVacuolar protein sorting-associated protein 13, VPS13 adaptor binding domainInterproscan
IPR018303PTMP-type ATPase, phosphorylation siteInterproscan
IPR023214Homologous_superfamilyHAD superfamilyInterproscan
IPR023298Homologous_superfamilyP-type ATPase, transmembrane domain superfamilyInterproscan
IPR023299Homologous_superfamilyP-type ATPase, cytoplasmic domain NInterproscan
IPR026847FamilyVacuolar protein sorting-associated protein 13Interproscan
IPR026854DomainVacuolar protein sorting-associated protein 13-like, N-terminal domainInterproscan
IPR031642DomainVPS13, middle RBG modulesInterproscan
IPR031645DomainVacuolar protein sorting-associated protein 13, DH-like domainInterproscan
IPR031646DomainVacuolar protein sorting-associated protein 13, extended choreinInterproscan
IPR036412Homologous_superfamilyHAD-like superfamilyInterproscan
IPR044492DomainP-type ATPase, haloacid dehalogenase domainInterproscan
IPR047820FamilyP5A-type ATPaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR16166VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0005215Molecular Functiontransporter activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006623Biological Processprotein targeting to vacuoleInterproscan
GO:0007005Biological Processmitochondrion organizationInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0019898Cellular Componentextrinsic component of membraneInterproscan
GO:0045053Biological Processprotein retention in Golgi apparatusInterproscan
GO:0140358Molecular FunctionP-type transmembrane transporter activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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