Gene detail

Detailed information of OFRAG00000004457.1 in Osedax frankpressi Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
OFRAG00000004457.1	1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE	tig00000670	336155	364285	-

Gene Structure

More details in Jbrowse Sequence

CDS

OFRAG00000004457.1

ATGCCGGAATTCACTTACACTGAATTTGCACCCTTGCACGACGAGGATAACGCCTCGACAGGCAACTTCTTGAAACGCTTCTTTATAAAATCATCTCCGACTGATTCATCTTTCTCTGATAAAGCCATTGAAGCAGTCCCAAATTCTTCGAAGAGCTCGAATTCAATTTGCAAAGATGTAGAGCCTCGAGGCAACGAGGAAATAAACTCAATTACTGGCGATTCAAACAAATCGTCACCTCGGACGCTATCCGGCGTTTTAAGTCGTGTAAGCAATATCCTCGACCGAAGGAGTAAGATTCCGCAAGCTTACCGCGACGCCGACTTCCGGCGTTTCTGGATGGCTGACGACGCTTGTCGTCAATGCTACGAGTGTTCTACTCGCTTCAGCACATTTCGACGACGACACCACTGCCGTGTCTGCGGTCAGATCTTTTGTTCGCGGTGTTGCGATGCCAGCCTGCCCGGACAGGTCATCGGTTATACCGGTAGTTTAAGGGTGTGTACCTATTGCCATAAGGTGGTCATGTCTTATTACTCTCAACAGGATATCGAAGGCATCGGCTCCCTTAGTTTCGACATCAAGCACCATATCGAGGAGATCAAACAGACGACGTCGACTCTCTCCGACGATTCGTCTTCCGTCCGCGAAACGGCCGACTGCGATTTCTCGAGCGTCGCCGGCGATTACAAAGGCAACGATTCGATTCCCTCGAAAAACAGAAATCTTAGGTACTTGTTTAATCAAAACACTTCATTCGAGGAGGACAATATCTCTGTGATATGTGACCAAGGTCCATTTGATTCCTGCAACACACCTCCACCAAATGATGCTCCAACTCCAGACTGCATTCGAGAACGCCGCATTCTACTGGCTAATACAGTTGACCTTGAAGACCTTTGGCTGTCGGTGAGTCACCCTTTTCGTGGGGTGCCCTTGGCTAGTCATCGACACCGCTTTTCGACGTACTCCCAGTGTCTGATTGGCAGCGAGCTCGTCGATTGGCTGGTTACGTCGGATCGCGCAAATTGCAGGCTTCAGGCCAGCATCATCGGACAGGCGATGCTCGACGCGAAATGGATTATGTGTATCACGTCGATTGCGGACACCACGTTTAAAGACTCCTACGACCTCTACGGACCTGGAAACGCAGTACAAACTGTGGAGCCTCGGGGGAAAAAAAACCAAAGCGAGCATGAGCCAGACTGGGTGAAGGATATCGACGTCGTGGAATTCGACGAAAACAGCCAAGAGAAGTTGATTCTGGCAACGGAGGATGTCTGCAAGGAGGATTCTTTGTTTCATAGCGAAACCGACACAAATTCAAGCGACGAAAATACCATTTCATGTCAAGAAAGCTGCCAGGACGAAGTCAAATACACTGTTCAAGGTTTGAGCGATGGTAACATAGGCAACAGTAATGCCAACCTCCAATGGTACCTTAGGGAGCCTTCCGAAGATGAAGCGTACTCCTATCACTCCATAAGAAATAAACAAGCTGAACACTTATCCTCCTATGCTGAACGACTGTTGGAAGATGAAAGCCCCACTTCATCCTGCTCTGGCATTATTAGCCCCACCCACTGTCTCACCTCCTCTCCGACCTCCCCTCATTCCGCCTCCTCCCCGACCTCCCCTCTCTCCGCCTCCTCTCCGACCTCCCCTCACTCCACCTCCTCTCCGACCTCCCCTCCCTCCACCTCCTCTCCGACCTCCTCTCCGACCTCCCCTACCTCCACTCCCTGTCCCACCGCCGATGACATCTCTCTGACCTCCCTGTGGAGAGATAAACTCCTCTCATTGGTCAACTCAGTACTCAGGCAACTCTACGCAGAACCCTCACCCATCATCAACAGACAATTAGACATCAGAAGCATTTTGAAAATCAAAAAGATCTCTGGAGCTGTTGGCAGCGTGTCAGATTGCGCTGTTATGTCAGCTGTCGTCTGCTCAAAGAAACTCGCTGACCGTGGTCAGCCATCGAGATTAACTGGCGCCGCCATGCTGCTTCTCGACTCCGCGATTGTCTACCAACGAGTTGAGGACAAACTATCCTCCTTGGAACCACAAATACTGCAAGAGAAACAGTACCTGCGTAAGTGTGTTGATCGTATAGCTGCACTTCGGCCTAATATCCTATTGGTCAGCAAGACGATCTCGCGAGTTGCTCAACACTTCCTGCAGGAGAAGGGTATCACGTACATCCTGAACGTAAAACTTAGCGTTCTGCAGAGGGTTTCTATGTTGACAAAAGCGGAGATTGTGAAATCCGTTGACGGTCTTGTCGGTAAATCTGCTCTTGGTTACTGTTCTCAGTTCAAAGTTGTCACTTACGACATCTCGCCGGGTGTAACAAAGACATTGATGTACTTCCATGCAAATAACAACTTGAATCGTGGGGGCACCATCACCCTGCGCGGGGGATGCCTGGAGCAACTCATCATTGTTAAAAGGGTTCTAAACCAACTCCTAGTAACCGGGTACCATCACCGACTGGAGTTGGCCTACTTGATGGACAGTCACGCCTTTCCTTCGCCCCAGCACACGCCTCTACAACACGCGGCCATGTGCTCGCAGTGTAGCGAAATTGAAGTGTCAGAAGATACAGACTTACCTCTAATCAAAGACTACAACGGCATAGAAGAAGTTAAAGACACAAATAAATACGATGACATAATTTCTCCAGGCGTCGAAGCCGACGACAATGTGCTGATGAGATCGACCTCTGACCCCGGTGTAGCCGTGTCCTCCACCCCCGGAGTTTCCGTTGTCGCGGAGTCTCCGGGTCGAAGGTCGTACCGTCAATTCTCGGCTCACGTCGATCTTCTAAGACTCCTCAATGCTTCGCCTCACATCGTGATGCAGATGCCTTACCTCTGCCGGCATTTCAATGACAACCGGTCAGTCGTGGAGTTTCTTAGCTACTTGAAACCCGATCGAGACTTGTATATGTCGACTGCATGGGCCTGGGAGTCCGCATTCCCCCCAGCTACGTCATTAACCACACCCCCAGCTACATCCCTAACCACGCCCCCAGCTACGTCCTTAACCACACCCCCAGCTACATCCCTAACCACGCCCCAAGCTACATCATTAACCACACCCCCAGCTACATCCCTAACCACACCCCCAGCTACAGCCTTAACCACACCCCCAGCTACGTCCTTAACCACACCCCCAGCTACGTCCCTAACCGCACCCCAAGCTACGTCCCTAAACACACCCCCAACTACGTCCTTAACCACAATCCAAGCTACGTCCCTAAACACACCCCCAACTACGTCCCTAGTCACACCCCTAGCTACGTCCTTAACCACACCCCAAGCTACGTCCCTAGCCACACCCCCAACTACGTCCCTAGCCATTCCCTTCAACGCAAAGCTCCATGTTGCACCCCTAGTTGCAGAAGAGAAGAAAACGCCACATCGACTGCTCACGTGTCACATCGTCCCAGGACCATCTCTACAGGAATGCATGGCGGACTTCAGGGCAAATGGAGCTACGGTTGGAGCTAGACCCGAGCCCCAGACGCTTACGTTGCGTGCTCCGGCATCTAAAAAACCCGTTACGACTGACTGTTTGAAATCACTAAACCACCAGAAATTCCTTGTGAACTTTTCCAGTTACACTTTTGACTCGGTCGAGGCTACGATTTGCTGTGTTCAGCCCTGGGTGGTGCCAATGCACTACTACCGTCAGAGCGACATCTCTATCGGTGAGTTCTTGGAACGCTATTGCTTTCGCACTGTGTACCAATGTCCCAACTCAGTCTGCCAACAGGCCTCAAGCAGTCACTTGCGTCGCTTCTGCCATAACTCCACTTGTGTCCAGGTGCTACTGAAGAAGCTTGAAGTACCAATACCCGGCAGCCCTAACAGTGTGTTAATGTGGTCATGGTGTAAACTATGCAAGCAGGTGTCACCCGTGATGCCAATGTCAGCGGATTGCTGGTCGATGTCGTTTGCGAAGTACCTGGAGCTGCGTTTCCACGGCGATGCCTATATACGACGCACACAATACAATTCGACGGGTTCTAAAGTGGACCCTCAGGGGTCTAACATGGACTCGCGGCGATGTGAACACACATTCAATAAGGATCACTTCCAGTACTTTGGTCTGGGACACATTGTGGTCTCTTTCAAGTATTGCGCAATCATGCTCCATGACATCATCCTACCGCCGCGATGTATTAATATGATGAGACCTAGCACAGATACCAATGACATCAGAGACTCATTGTCCCACATCCTGAAACAAGGAATAACTGTTTACAATGACGTAATCGACTACCTAGCCAACGCTGAGACAGAAAGTAACGTCGCACTCATTAACGAGTACATGACTAACGCTAAGATGGAAAATGAGGAATTTGAAAGAAAAACTTCAATTCTCTTCAAAAAACAAATGAACGTACACGGTGATCGAATAGAATGGCTTTATGTTTTGGAGAACAATATTGCGGAGATGAAACGCTATGTTGCTGAAATTGTGTTCAGTTGGAATCAAAGACTTATTGACGCCGAGTTGGCTCCAAAGAAAGTTGACAAAAAAAGACAAAAAAGATCGTCTAGCAGAAAGCCGAATTTTACCTTGAAATCCGACACGAATGATTGCGGTATTGGACCCACTCACCCTACACCCACCCTATCTAGGCCCCTTCCTAGACCTCTTTTTACCCCGATGACTAGCACGCCTTCCAATTTCTCCACCCCGCTCGATAGCATTCTTCCCCCGAATCCCTTTGAGTAG

Transcript

OFRAG00000004457.1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00118	Cpn60_TCP1	TCP-1/cpn60 chaperonin family	Family	Interproscan
PF00610	DEP	Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)	Domain	Interproscan
PF01363	FYVE	FYVE zinc finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000306	Domain	FYVE zinc finger	Interproscan
IPR000591	Domain	DEP domain	Interproscan
IPR002423	Family	Chaperonin Cpn60/GroEL/TCP-1 family	Interproscan
IPR011011	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR017455	Domain	Zinc finger, FYVE-related	Interproscan
IPR027409	Homologous_superfamily	GroEL-like apical domain superfamily	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR036390	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan
IPR043548	Family	1-phosphatidylinositol-3phosphate-5-kinase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46715	1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000285	Molecular Function	1-phosphatidylinositol-3-phosphate 5-kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0012506	Cellular Component	vesicle membrane	Interproscan
GO:0030593	Biological Process	neutrophil chemotaxis	Interproscan
GO:0031410	Cellular Component	cytoplasmic vesicle	Interproscan
GO:0032438	Biological Process	melanosome organization	Interproscan
GO:0035556	Biological Process	intracellular signal transduction	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan
GO:0052810	Molecular Function	1-phosphatidylinositol-5-kinase activity	Interproscan
GO:0090385	Biological Process	phagosome-lysosome fusion	Interproscan
GO:1903426	Biological Process	regulation of reactive oxygen species biosynthetic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-