Gene detail

Detailed information of OFRAG00000004276.1 in Osedax frankpressi Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
OFRAG00000004276.1	DYNEIN HEAVY CHAIN FAMILY PROTEIN	tig00000642	27939	61713	+

Gene Structure

More details in Jbrowse Sequence

CDS

OFRAG00000004276.1

TTGTTAGGTCGTAACCGAGTTCTCGCAGATCTTTGTAAAAATGAACTTCAAGAGCAAATCAAACAATATAAAAGCGCTCAATTCAAATTCAAAGCAATTCAAAAGGATATGCAGGCGGCCGAGAAAAAGGTGGAAGAGTGTACGGCCATCCTGGAAGGAGTAGGGGAACAACTTCGCCTCTGGAAGAAGAGTCTTAATAAGGCGAAATGGCGTCGGTCTCGTATCCATGGTGATGCTATGCTGGCGGCCGCCATCTCCGCGTACTTTGGTCCCTTTTCAAGCGACTCCAGAGCGCTTCTGTTTCGCAAGTGGACCGACATCATGGATTCGGATCGAGTCGAGTTTTTAGACGAGTTGGAGCATTGCAACATCGACTCGTTCCGCAACGCCAACCTCGGTTCCGACACTACTACGACTGCGTGCAGCGAAATCCTTTTATACAGTGGAGATTTTAATTTCGCAATGGTCATAGGTAAACAGGAAGTCGTGAATTCCTGGCGTCTATTTGTCAAAGAAGAAACGCTGGACGTAGACCAGTACTCGGTGACTAATGCCTTGATAGCTTGGCTGGCGATATCTGTACCCTCTACTCCGGCGATGCCTACCGCAACCGTTAAAGATAAAGGTTCGAATGATGGGGCGGCTTTGGTTAGCAAGAGTAACGCGGAGAAGGAAGATGCTGTCGAGGCGGACGTCGAAAACGTGAACGCAATGAACACTTTCTACGCTGCCCAATGGCCTTGCCTTCTCGATCCGGATTCGTTGGCCACTCGGTGGATTCGAGTGATTACCGCGATTCAAGAGCCGACCGATAAACCCGGGGAATTCTTTAACGGAAGCGTGGTGGATGTCAAAAGAAAACTATCGAGAAAAGCGGAGAACATATCGATGGATGAAAAAGATATATCTAATGAAGAAATTACATTTTCTACAGTAACAGATGAATGGAAAGAATATTTCAATAATTCAAATTTCTATGATTATGAAGAAGAAATTACACACCCAGTCAATAAATTAATTGTAATCAATTCTGATTCAAATCAAAAATTTAAAAAGCAAATCATAACTGCTGTTATTCATGGCTTAAAATTGTTAATTACTCATTTTGAATGCTTTAAAGAGAAAGTGGAGTTTTGTAATCTGTTACGTAGGAATTACATAACTCGTAACAATATTCTTTATGTCCTTATTGAAACTTACAAAATACCAGTGCATTATAATTTCTCATTGTTTGTGAGCCTGAGTTTCAATAATGACTCGATGAGAAGTACACCATACCATTGGTTCACTCTGATTGACATGACTTTGGACGAGGAAGCTATTTACGCTCGTCTGCTTTCCGAAGTGATGAAAGTCGAAAGAACTGAATTCGAATGCCAACAGAGATCGGCAATATTCGATCGCATTGAAATGGAGTCAACTATTGAAAAAGAAGAGGAAAAACTCCTCGAGGAAATTCGCTGTCGTCGCAACCCGTTAATCGACGACCGTTCGGTGTTGCCGTTGGTGCGTTCGCACGTCTCTCTAGTCGACGAAGCGAAACGCATTCTCTACGAATGCGAATCCTCTTCCCAACTGATGAGAGAGCGGAGTTTGCCTTACACTCGTATGGCACGCAGGGCGGCCCGCACTTTCAGCATGGTACGCCGTCTAACCTCGCTAAGGGGTGTTGAGGACATTTACGAATTCGACTTCAACGACTACAGGAGAGTTTTCGCCGAAACTGTGAAATCAAGATTTCGCGGCAAAGAGTTTTCAGGCGAGCACCCATCTAGAGCACGAGAGCTTCACAACGCTGTAACTGCCGCCATATTTGAGTATGCCGGCGACATGATGTTTGAAACTCACAGACGTCTGTTCGCCTTTCTTCTAGCAGCCCAGGAGCTTACAGAACACGAAGTAACGGATAACATCGCAGAACGGACGGAAAAGGGACGGGGGTATCCTAAACTTGCCGAATCACTCGAGTTCAAGACATTTGTCGATGGCGTGAGGTGCGTGGACCGCGTGGAAAATGAAACAAGAGCAGAACGTCCTGATTTTCTTTCAGAAAAAGCTTGGAAGGATTGCCGCGTGTTGTCTGAAGATTTTGCGTGCTTCGAGGCAATATGTGAATCCATGCGACTTCGCACGGACTTATGGCAAGAGTATCTAACGTGCGACGTGTCCGTCGTAGTCCCTACGCCTCTGTGTAAAACCTACGCCTTATCGGTAATGCAGAAATGTATCCTGCTGAAAATCTGCCGTCCTGACAAATTCTCCGAGTTATCCGAAGTATTATCTCGCGACTACATGGCTAGTCTATATACGGCAGCCAAAGGCATCGACGTCAGTCGTCTTCTTCGCGACACCACTGCCAACGACATCGTATTGTTTGTGTTGCCTAGCAACTCGGCTGCAGCCTGTCACAGCACAATTGGTACTGTTATAAATAATCCTTTAAGAGAAATAAGAATTTCTGCTGAAAAGAATGATATTGAAGTCGATGTTATAAGTTTTGGTAGAAAAGCAGGAGATAATGTTGTATTCAATCAAATTAAACAAAGCATTGAAGATGATAATTGGTTATTCATTGAAAATATTCAGCTTTGTGACACTTGGTCATTAGAATTGATTCATCTTTTACAAGATATCAATTCCGGAAAACTGCTTGGATTGGAACCCAACTCAAATTTCAAACTATGGATGTCCATAGAACTGTGCGACAGAATTATCCAGTTGCCTAGTATCCTGAAAAGGCATTCAATAAGAATGACTGCAGAGATGACATTTGACTTTAAATTAAATTTAAAACTAATTCACACCTTTGCCAAACGCTACGTGAAGAATCGCAAACTCTCTCATTTTGAACTCGACAAGGCCCTTTCGCAAACCGACTCCCTCGAAGTGATTTGCATGTTGCATTGCATTCTGGTAACATTATGTCAAATGAGTGGCGTACATGTTCTCAGAGATTCGACGACTCAATGGTCCATGGAAGAGACTTTGACATCTGCTTTAAGGGCTTCGCTGATGGTCGCAACACAATGTCAGAGCTATAAGGGGATACAAGAAATTGTGTTCACCATATATGGCAGCCATTGTCTACACAATGAAAATCTGCAGTGGATAAAATCTATTTGTAATTCTTTGATAATTCCTTCTTCAGTTTTAAAACAGCAAACATGTGCTGCTGAAGGTGTAGGAAATTTACTCAACATATTAATGTCACATGGTGATAATCCCGGTGATGACTCATTCGATGTTCGCGTGTCAAAACTCCCTGATCTGATTGGACGAGAAAGTAGTCTGCAAAATATATTCAAAATTAACCTTGAGAAATATTACAGCAAGACCATGTCCTCTGATTTAAGACGTCTATATGGATCTCTAAGGCGATGGCCCTGTATCGAGGAGATGAATGTGAAACTAATAAGATATAAAACGAAGGTAGAATCACTTCAACTTCCTGTTGATTTGGGTATGGACGGATTCTACGCGATAGAAAGATTTGTTCAGACCGAGATCACGGAGTTCAAAGCATTGAAAACTTACATTCTGAAGGATATACATCTGATGCTAAATGTTAATTGTGCTGAACTTCCCCCGATTGGAGCGGCTTTGACACTTATGAATTGTGTCAGAGATGATAGAGTTCCACATGAATGGACTAATAATTCTGCGATTACGAGTCGGACATTAAATGTTTGGATCTCGAGATTATCAGAAAGAGCCGATGACCTCGTTACCTATTTGAATAGGAAACGAGGGTCACATGCGTCGACCTTTGACCTCGGTGTGTTTATTCATCCGGAACACCTGGTGCCGGCAGTTTTAATAACAATGGCCCGACGCCTCTTCAAGCCATTACATCGCCTAAGTCTGCAATTCAAGGTAATGAAGAGATATGAGAAATTGAATTCATCACTTGGAGAAATTTACATAATTAACTTAGGCTTACATAACTCTGTATGGTGTTACAATAATGAAACTGGAGACTGCATGTCCACTAGAGAAATTTGCGAAGGAAAACTAGAGTATAGTATGAAATTGCCTCCAGTTCTATTACAGTGTGTAGATACTGCCATCAGCCAAACCAACATGTGGTTATACAATTTCCCTGTATACTCTGACGAATCAGAAAAAGGACAAATAATTACCAAAATTAGACTTAAATGCCAACTAGAAGCCAGATTATGGAATGAAAGAAGATCATATTTATTTACAACTTAA

Transcript

OFRAG00000004276.1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12781	AAA_9	ATP-binding dynein motor region	Domain	Interproscan
PF18199	Dynein_C	Dynein heavy chain C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR026983	Family	Dynein heavy chain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR035706	Domain	Dynein heavy chain, ATP-binding dynein motor region	Interproscan
IPR041228	Domain	Dynein heavy chain, C-terminal domain	Interproscan
IPR043160	Homologous_superfamily	Dynein heavy chain, C-terminal domain, barrel region	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10676	DYNEIN HEAVY CHAIN FAMILY PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0007018	Biological Process	microtubule-based movement	Interproscan
GO:0008569	Molecular Function	minus-end-directed microtubule motor activity	Interproscan
GO:0030286	Cellular Component	dynein complex	Interproscan
GO:0036156	Cellular Component	inner dynein arm	Interproscan
GO:0045505	Molecular Function	dynein intermediate chain binding	Interproscan
GO:0051959	Molecular Function	dynein light intermediate chain binding	Interproscan
GO:0060294	Biological Process	cilium movement involved in cell motility	Interproscan
GO:0097729	Cellular Component	9+2 motile cilium	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-