Gene detail

Detailed information of OALVG00000032528.1 in Oasisia alvinae Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
OALVG00000032528.1	TETRATRICOPEPTIDE REPEAT PROTEIN 31	tig00015198	2234137	2285667	-

Gene Structure

More details in Jbrowse Sequence

CDS

OALVG00000032528.1

ATGGCGATGAACCAAGATGCTTCGAAGAGATCTGATATGTCAGAGATGGACACAGTGGAAGAAGGATTGGACACAACATTTATACATAGTCGAGAGTTGGCAATCGAGGCGAATGAGGCAGCAATGAGGGGAGAGTTTGATGAGGCCATTCGCCTCTTCACTGTGGCCGTCAAACTTGACCCCACTGAGGTCAGGTTTTATGGCAATCGGTCGTACTGTTATGATGGGAAAAAACAATACAAAAAGGCCTTGGAAGATGCCCGGCGATGTGTTGATCTCGAGCCACTTTGGCCCAAAGGACATTTCCGTTTAGGGCGGGCCTTGGCAGGACTCAAGATGTTTGCTAAGGCAGAGAAGGCCTTTGAGAGGGTGCAGGAGCTGGACCCCACATGCTGCGATGCCAGAGCAGAAATCTTGCGTGTTCGGGCACATCAAATAATGGAAATGGGATTTAGCTGGGAAGATGCAGTTCAGGCTACCCAGAGACACACGGACATGGACGAGGCTGTTGATGCAATCATTACTGGGTTTGCCCAAGAGACACCTCCAACATGTGATGTCTACATCTCGGATGAAGAAGAGAACAACACTATAGCAGCACCGCCGGTGGCAGCACCACTGTTGGCAGCACCGGCGGTGCATGCACCAGTGCAAGTGGTGGCGGAATCTAAGCCAAAGGATATCAAAATGGACCCCTCCAACCCTGAGGGTCTGGGCAGCCTGTGGGTCGGCCACCTGAAGCCAGAAGTGACAAATCTACAACTCAATAAGTTGTTTTCCAAGTATGGGGTGGTATCTAGCATCTACCGCGTGCCTCACAGATGCTGTGCGTTTGTCAACTTCCAGACCAAAGGTTCTGCTGGGATGGCCATGGCTAAACTACAGGGCATGGAATGTTTTGGTTGGCCTCTACAAATACGGTTTCCTGACCACCCAAAGCGCCTTGCAGAACATGGCCACAAAATTCCTGCCACTGCCAGTGCAGCAAGTGACCCTGGCACAGTACCCAGTGACATTGGCATGGTGGCAAGTGGCATGGTACCAAGTGACAGCAGCTTGTTGACAAGTGACAGTAGTATGGTACCAAGTGATAGTAGCCTGGTGACAAATGATAGTGGCATGGTACCAAGTGAAAGTGACAGTGGTGTACTGTTGAGTGACAATGGTACAGTGACAAGTGAAAATGGTGTGATGACAAGTGATTCTGTTCTGGGGGCAAGTGACAGGGGAGCTGAGACAAAGAGAACTAGTTTGGTGACACATGAGGGGGACACAGTTCCTAGTGACAGTGACATGGCACCAGGTGACAGGATCACAGTGACAAATGACAGGGACATAGTGACAAGTGAAAGGGACGTAGAGACAAGTGGAGTAAGCAAGCCGAGAAGCTACAGCAGTGTCTTGAAGCAACAAACACAAGTGAAGCAACCGCTACAACCACCGCTACATCAGCCGCTACAGCAGCGGACCCCAACACAGCTACACGGCTCACACTATGACATAAAGATGGATCCATCAAATCCTGAAGGAATATCGACTCTGTGGGTTGGAAATGTAGAGAAGGAAGTGACATGCAGTACCATCAAGACCATGTTTTCCAAATATGGCGAGGTGGTTAACGTGTTTCCTAAACCTTATGTCAAGTGTGCATTTGTTGAATTCAAGAAAAAAGAAAGTGCGGGAAAGGCCATGGCTGCATTACAGGGGTCCGAGTGTGCTGGGAAGCATCTACGCATCAGGTTTCCTGACCATCCAAAGCCAAATGGTCCATACCAACAACAGGCACACTGTCAAGACAAACAGCATTTACAGCAGCAACAACAACAACAACATCAGCAGCAGCAGCAGCAACAACAACAGCAACAACAACAAAAGCAACAACAACAGCAACAACAACAGAAGCAGAAACAGAAGCAGCAGCAGAGGAAGTATAATTTGAGATGTGAAATGTGTGGTATCTCATGTCACCACGGCAACCAGATGATATTACACTTGGCTGGCAAAAGTCACCAGCAGATGCTGCAGCAGCAGCAGCAACAACAGCAACAACAGCAACAACAGCCTCAGCAAGCTGAGTCAGCACAGACACAGTTGACATGTGGACTGTGTGATGTCTCCTGCCCCTATGACAACCAAATGATACAACACTTAACAGGCAAACGCCACAAACAGAATGAACAGAATCAGCAGAATCAGCAGAATCAGCAGAATCAGCAGAATCAGCAGCAGCAACAACAGCTGCAGCAACAACAGCAGCAGCAACAACAGCTGCAGCAACAACAGATGCAGCATAGCTCAACTACTGAACCAGGCCAGTTAGAAATGGGTGCCTCAAGAACTCAGAAGGTGACAGTGAGATGTGCTCCATGTGATGTGACATGTCTCAGCACGGACCAACTGAAAGAGCACTTTGAAGGCAGATGTCATCGGCTGAAGCTGCAGCAGCTGAAACGATTATCCACACAACAACAACAACAGCAGAAACACCAGCAACAACAGCACCAGCCAGTACAGCTGGAGTTTGAGTTACTGACATGTGATGTATGTGACGTTGTATGTGTCTACAAAGAACATCTAGTGCTGCACTTGAGAGGAAAGAGGCACCAAGAGAAGGTGCAGCTGCTGCTAGAGGAGGAGAAGCGGAAAGAAACCCAGAAGCAGCTGGAGGTGAAGAAACAAAAAGAGCAACAGAAACAACAGCTGCTTGAGCAGCAAGAAAAGCACAAGGCATTGGAGGAGAGGAAGTTGCAAGAGCGACAGAAATGTGAAGAAGAAGAGCAGTTGCACCAGGAACAGCAGAGGCAGAAAGAACAGCAGAACGTGATGTCACTAAAGGTGCGATGTGAGATTTGTGACGTCACGTGCCCGAATAGCATCCAATTGGATGAGCACTTGAAAGGCAAACGTCATAGCCAGATACAGCAGATTTGGGAGGCACAGCAGAAACAGAAACAACAACCCTTTCAGAATCAGGTTCAGCTAGAAAAACAACAAGAACTAAAGATGAACCAATCACTGGTTAAAGAACAGGATCATCTAGAACACAACCAACAGCAAGATCTTATGAAAGGACAAGAAGAGGCTAATTACACAGAACAGCAGAGTCATAATGAATTGATGAAACAACAAGAAAGAAAACAAAAAGAAGCCCAGAAACAGCAAGAACAGCAGAGAGCCCAGAAACAGCAAGCCCAGAAACAGCAAACTCAACCAGTGTTAGAAGTGAGTGCCTCAAGAACACAGAGTCTGAGTGGTGTCAGATGTGCTCCGTGTGATGTGACGTGTCTCAATTCAGTGCAACTGAAACAGCACCTTGGAGGCAAACGTCATCGGCTGAAACTAGAGCAGCTGAAAGGAGTGTCCGCACAACAACAAGAACAACAACAACAGCCAGAACAGCTGAGGGTTGAACCTGTGACATGTGACTTATGTGACATGGCCTGCCTCAACGAGGAGCAGTTAATGCTGCACTTGATAGGAAAGAGACACCAAGAGAAGGTGCAGCTGCTGCTAGAAGAAGGGAAGCAGAAAGAAACCCAGAAGCAGTTAGAGCTGAAGAAACAAAAAGAGCAACAGAAACAACAGCTGCTTGAGCAGCAAGAAAAGCAGAAGGCACTGGAGGAGAAGAAGTTGCAAGAGCAACACAAACGTGAAGAAGAAGAGCAGTTGCACCAGGAACAGCAGAGACAGCTGGAACAGCAGAAGCAAGAAGCTGTGCTGAAACAGGAGAACAAAAGGAGGCAGCAGGAACAGCAGAGGCTGAAAGAACAGCAGAACACAGTGTCACTAAAAGTGCGATGTGAGATTTGTGACATCACGTGCCCTAATAGCATCCAATTGGATGAACACTTGAAAGGCAAACGTCATAGCCAGGTACAGCAGATTTTGGAGGCACAGCAGAAACAGAAACAGCTAAACTTTCAGAAACAGCTTCAGCTAGAAAAACAACAAGAACTGAAGATGACCCAATCACTAGTGAAAGAACAGGATCATCTAGAACACAAGCAACAACAAGATCTTATGAAAGAACAGCAAAGTCATAACGAATTGATGAAACATCAAGAAAGAAAACAAACAGAAGCCCAGAAACAGCAAGAACAGCAGGAAGCCCAGAAACAGCAAGAACAGCAGCAAGCCCAGAAACAGCAAGAACAGCAGCAAGCCCAGAAACAGCAAGAACAGCAGCAAGCCCAGAAACAGCAAGAACAACAGAAAGCCCAGAAACAGCAAGAACAGCAGCAAGCCCAGAAACAGCAAGAACAGCAGAAAGCCCAGAAACAGCAAGAACAGCAGCAAGCCCAGAAACAGCAAGAACAGCAGCAAGCCCAGAAACAGCAAACTCAACCAGTGGTATGTGAATTGTGTCATGTGACCTGCCCTAATGTTAATCAGTTCAATGAACACACCAGGGGCAAGCGTCACCTGCAGATGAAGCAGCTACAGAGTGAACAGCAGGAGAAGAGACAAGAACTGGAGACAGAAGAAAGGAAGAGACAGCAAGAGGAGAACGAGCAGGAACAGCTGAAGAATGTACAGCTTCAGAAACAACAAGAACTGGAGAAGCAAAACCAGGAGAAACTTGAGAAGCAACAAGAGTTGGAGAAACAACAACAGGAGAAACAGCAAGAATGGGAGAAACAATTGGAACAGCAAGAACTGGAGAAACTGCTAAAACAACAAGAGCAGGAGAAAAAGCTGGAACAACAAGGACAGTTGAAACAGCTAGAACAAGTAGAACAGAACTCTCATTTAGAACAACAAGAACACAAAACACAGCTAGAACAACAGGAACAGACGGAACAGCTACAACAACCAGAAGAGAAGAAAGAGCCAGAAAAACAAAAACAGCAAGAACAAGAGAAACAGCTGGACCAAGAAGCACACAAGAAGCTGCAAAAAGACCAAAAGCATCAAGAAGACGAGCAGCGAGAAGACTGGGAGACTCAAGTGTGTCAGGAGGAAGACAGTCTCCTAAAGCATGAAGAGATATGGTCACTTTTGACTGTTTTGCCATCGCCCTCCCAGTCAAGCTACACACAGGAGACCAATCTTGAAACATTCGACACATCGCTTTCATCGCCTCAGAGTTCATCACATCACATGTGTACAGCAAAACAAGCAAACCAAACAGATCAGTGGAGCTCTCTCAACCCGGAGGGAAAGAAGCAGTATGACAGGAACTTCCTCCTACAGCTTCAGTATGTTCGGCAGTCAATCACAAGGCCTGCTTACTTGCTTCAACACCGCGACATCTTGCTTGATGACGGGACAGAATGTGCTGGACAGCATCTAAGCATCAGGTTTCCTGACCACTCAAACCCATACGGGCCATATCAACCACCGCCACACAGTCAAGGCAAACAGAAGCTGCAGCAACTGCAGCAGCAACAACAACAGCAGCAGCAGCAACAACCGCAGCAGCAACAACAACAGCAGGGAAAGCATAAATTGATATGTGAACTGTGTGAGTTTTCCTGCCACTATGACAACCACATGCTGCTACACTTGGCTGGGAAATGCCACAGGCAGATTGATCTGGAGCAACAACAACAGCAGCAGAAGCAGAAGGAGCAGCAGCAACAACAGGATCCACAGCAGCAACAACAGCAGCAAGTCGAGTCACCAATGTTGAAGTTGATATGTGAGCTGTGTGATGCTGTCTGTCCCTGTGACAGCCATATGACGGAACACTTGTTGGGCAAACGTCACATAAAGAACAAACGGAAACAACTGCTGCAACAACAGCTGCTGCAGCAGAGCTCAGAGACTGAACCAAGCCAGCTAGAACTGGGTGTCCCAGGATCACAGAGCCTGGGTGACGTAAGATGTGACGCGTGTGATGTGACATGTCTCAATAATGAGCAGCTGATGCGACACTTGGGAGGCAAACGTCATCAGCTGCAGAAGCTGCAGGACCTGTCCCTACAGCGACACAGTGAGGGGGGCGAAGTGAACTCAGATGGTACCATACCCAGGTCATGTGACCAGACAACACAGACTGTGGATACGTGTCCAGCTGACCCAGCCAGCCTGGCCACAGCGGCTGACCACAGTCACTGTGATGAAGGCAATCAATCAACGTCTGAGTTCTGTAGGAAGTTCCACAAGAGCTTTGAAGCAATGCAGCATAGCCTCGCGGACTTCACAGAACAGCAGCAGCAGAACAGCCTGGCCACACAGCAGTTCCTGGGAGATGTCGTGGAGATGAGAGAGGCAGAGATCTCTGGTCTGTCGCGGTCTCTGGACCACTTGACCCAGCTACTGTCCAGTAACCTGGAGGGCCTGAGATCAGAGCAGAAGAAGCAGTCAGCTGGTGGTCAGCTGAGGCTGGACGCCCTCACTGACCACTGCACACTGGCCATGGAGGATGACATCCAGTGTGACAGAGAGTTGTTGAGGCAGACAGCAGTGGGAGTTGTTGGAACGTTACAAAGACAGATAGACGCTGTGAAGGCCAGCCTCAGTGACCTGGCTGGACTCCAGAGACAACAGATGGCGACACAGCAGCAGGCGACGGAGGAGTTTGTGTCGGGTCTACTCGAGAGACTGCGAGACCACCAGCAGCTGGTGAAGACCTTCACAGAGAGACAGGCAGAGGACCTCCAACGACACATACAACACGTGCAGGATGTCAGCACCTCGCACAACCAACTCAGTCAGATGCTGATGGAGGAACTTGAGAAGACAATGCAAGAAGTGATGGAGAGACAGAAAAGTCATTTGTCACAGAATGTCACTCAGATTGCGGAAGGACTACAGGAGACATTGGATGTCAATGAAGCTCTAGGGCGTGACACGGCAAGTACCTCAGCAGCCCTGGGAAACCACAGCAGTGACCGAGGGGAAAGGTTGTGTGCCACATACAGCACAAGTCATGTGACCACACACATCACTCAGATGGCTAAGCAGCTGGACGACATCTCAGAGACACAGAGAGACCTTAGAGACCAGCTCTCTCACACCAACACACAGTGGAGCAGGGACCAGGCCGGTGTCGTCCTGGAGGGTCTCACAGAGCACGGAGACAAGTTGGCCGCATCAACACAGGCACAGACACAGAAGATTCAGGAGCTGCAGGAGGATTGCTCAACGGCCGTCGATGAAATCTACAAGAAACAGACCATACTGCACAGCCGGATGAGTGCGAGAGTGCAGCGCCATCTAGGGGGCCTCCAGGGGGCAGCACAAGACGTGGTCGAGTGGTCAGCGAACATGAGTGGCGCCCTCACGGCACAGCACCAGGACATTGAGACGTATCTGACAGAGACACATCAACGAGACACTCTGCCCGTGGCAGTCGAGTTGGACGTGGCTGGACGAGTGGACGACAGACTGGACACAACTGGACACACAGTGGACCAAAGACTATTGTCTGATCCACCTGTTATCTCTATCTCCTCACTGAAGAGTGACAAAGCACCAGATGAATCTACTGATATCAACTTAACATAA

Transcript

OALVG00000032528.1

Protein

OALVG00000032528.1

MAMNQDASKRSDMSEMDTVEEGLDTTFIHSRELAIEANEAAMRGEFDEAIRLFTVAVKLDPTEVRFYGNRSYCYDGKKQYKKALEDARRCVDLEPLWPKGHFRLGRALAGLKMFAKAEKAFERVQELDPTCCDARAEILRVRAHQIMEMGFSWEDAVQATQRHTDMDEAVDAIITGFAQETPPTCDVYISDEEENNTIAAPPVAAPLLAAPAVHAPVQVVAESKPKDIKMDPSNPEGLGSLWVGHLKPEVTNLQLNKLFSKYGVVSSIYRVPHRCCAFVNFQTKGSAGMAMAKLQGMECFGWPLQIRFPDHPKRLAEHGHKIPATASAASDPGTVPSDIGMVASGMVPSDSSLLTSDSSMVPSDSSLVTNDSGMVPSESDSGVLLSDNGTVTSENGVMTSDSVLGASDRGAETKRTSLVTHEGDTVPSDSDMAPGDRITVTNDRDIVTSERDVETSGVSKPRSYSSVLKQQTQVKQPLQPPLHQPLQQRTPTQLHGSHYDIKMDPSNPEGISTLWVGNVEKEVTCSTIKTMFSKYGEVVNVFPKPYVKCAFVEFKKKESAGKAMAALQGSECAGKHLRIRFPDHPKPNGPYQQQAHCQDKQHLQQQQQQQHQQQQQQQQQQQQQKQQQQQQQQKQKQKQQQRKYNLRCEMCGISCHHGNQMILHLAGKSHQQMLQQQQQQQQQQQQQPQQAESAQTQLTCGLCDVSCPYDNQMIQHLTGKRHKQNEQNQQNQQNQQNQQNQQQQQQLQQQQQQQQQLQQQQMQHSSTTEPGQLEMGASRTQKVTVRCAPCDVTCLSTDQLKEHFEGRCHRLKLQQLKRLSTQQQQQQKHQQQQHQPVQLEFELLTCDVCDVVCVYKEHLVLHLRGKRHQEKVQLLLEEEKRKETQKQLEVKKQKEQQKQQLLEQQEKHKALEERKLQERQKCEEEEQLHQEQQRQKEQQNVMSLKVRCEICDVTCPNSIQLDEHLKGKRHSQIQQIWEAQQKQKQQPFQNQVQLEKQQELKMNQSLVKEQDHLEHNQQQDLMKGQEEANYTEQQSHNELMKQQERKQKEAQKQQEQQRAQKQQAQKQQTQPVLEVSASRTQSLSGVRCAPCDVTCLNSVQLKQHLGGKRHRLKLEQLKGVSAQQQEQQQQPEQLRVEPVTCDLCDMACLNEEQLMLHLIGKRHQEKVQLLLEEGKQKETQKQLELKKQKEQQKQQLLEQQEKQKALEEKKLQEQHKREEEEQLHQEQQRQLEQQKQEAVLKQENKRRQQEQQRLKEQQNTVSLKVRCEICDITCPNSIQLDEHLKGKRHSQVQQILEAQQKQKQLNFQKQLQLEKQQELKMTQSLVKEQDHLEHKQQQDLMKEQQSHNELMKHQERKQTEAQKQQEQQEAQKQQEQQQAQKQQEQQQAQKQQEQQQAQKQQEQQKAQKQQEQQQAQKQQEQQKAQKQQEQQQAQKQQEQQQAQKQQTQPVVCELCHVTCPNVNQFNEHTRGKRHLQMKQLQSEQQEKRQELETEERKRQQEENEQEQLKNVQLQKQQELEKQNQEKLEKQQELEKQQQEKQQEWEKQLEQQELEKLLKQQEQEKKLEQQGQLKQLEQVEQNSHLEQQEHKTQLEQQEQTEQLQQPEEKKEPEKQKQQEQEKQLDQEAHKKLQKDQKHQEDEQREDWETQVCQEEDSLLKHEEIWSLLTVLPSPSQSSYTQETNLETFDTSLSSPQSSSHHMCTAKQANQTDQWSSLNPEGKKQYDRNFLLQLQYVRQSITRPAYLLQHRDILLDDGTECAGQHLSIRFPDHSNPYGPYQPPPHSQGKQKLQQLQQQQQQQQQQQPQQQQQQQGKHKLICELCEFSCHYDNHMLLHLAGKCHRQIDLEQQQQQQKQKEQQQQQDPQQQQQQQVESPMLKLICELCDAVCPCDSHMTEHLLGKRHIKNKRKQLLQQQLLQQSSETEPSQLELGVPGSQSLGDVRCDACDVTCLNNEQLMRHLGGKRHQLQKLQDLSLQRHSEGGEVNSDGTIPRSCDQTTQTVDTCPADPASLATAADHSHCDEGNQSTSEFCRKFHKSFEAMQHSLADFTEQQQQNSLATQQFLGDVVEMREAEISGLSRSLDHLTQLLSSNLEGLRSEQKKQSAGGQLRLDALTDHCTLAMEDDIQCDRELLRQTAVGVVGTLQRQIDAVKASLSDLAGLQRQQMATQQQATEEFVSGLLERLRDHQQLVKTFTERQAEDLQRHIQHVQDVSTSHNQLSQMLMEELEKTMQEVMERQKSHLSQNVTQIAEGLQETLDVNEALGRDTASTSAALGNHSSDRGERLCATYSTSHVTTHITQMAKQLDDISETQRDLRDQLSHTNTQWSRDQAGVVLEGLTEHGDKLAASTQAQTQKIQELQEDCSTAVDEIYKKQTILHSRMSARVQRHLGGLQGAAQDVVEWSANMSGALTAQHQDIETYLTETHQRDTLPVAVELDVAGRVDDRLDTTGHTVDQRLLSDPPVISISSLKSDKAPDESTDINLT

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan
PF07719	TPR_2	Tetratricopeptide repeat	Repeat	Interproscan
PF12874	zf-met	Zinc-finger of C2H2 type	Domain	Interproscan
PF13181	TPR_8	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR003604	Domain	Matrin/U1-C-like, C2H2-type zinc finger	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR013087	Domain	Zinc finger C2H2-type	Interproscan
IPR013105	Repeat	Tetratricopeptide repeat 2	Interproscan
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR036236	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47678	TETRATRICOPEPTIDE REPEAT PROTEIN 31	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-