Gene detail

Detailed information of OALVG00000000403.1 in Oasisia alvinae Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
OALVG00000000403.1	3BP-1 RELATED RHOGAP	tig00000009	7496549	7532770	-

Gene Structure

More details in Jbrowse Sequence

CDS

OALVG00000000403.1

ATGTCGAAGAAAGATTGGAAGAAGCAATTTTATCGAGTCAAGCAGCTGGCAGGTCAAAATTTGGGCCGGGCTGCGAGGTCGGAGGTCTTGACCGAGGACCTACAGATGCTCGAGAAGCGAGTGGACCTGGTCAAGCAAGTATGTCACACCCTCGTGAAGAAGCTACAGACGTGCAGTCAGTCGCAGTCGGGTGACTTTGAGAGGCGACTGAAAAAGACCCCAGAGGCAGGTCTGTACAACAGTATGATCGAGTCGGCGACTCTCTTGGGAAACGACACGCTTCTGGGGCCAATGATTCAGCTATGTGGCAAGGCCCAGGGCGACCTCGCTCACTCACTCGTCAACTACGAGATGGCTGTGGAGACAAAGGTGATCTCACCCATCCAGCAGCTGCTTGAGAATGAGATTCCCACAATACAGAAACTGCGCAAACAGTTGACCCGACTCACACTGGACATGGACTCTGTGAGAACCAGGTACCAGACGGCTGCACGACAGACTCAGAACTCGGGCAGTCTGGGAGCGTCCACTACAAAGGCAGACAGCATCAGAGACGAACTGGACGAGGCCTGCACCAAAGTACAGCAGTGCAAGGACCAGTTGGCCACAGAGATGTACAACTTCGTGGCACGAGAGTCAGAATACAGCGAGTTACTCATCGAGTTGGTGCGGGAGAAGATGGACTACCACAGACAGGCCCTGGAGGCCCTGGACAACATGCTGCCCGAGATGACAGAGCAACTCGAGCAGTACTGTCAGATGCCAGTGTACGGCCTGGCCCTGGAGGAGCACTTGAGACGCAGCAACCGTGAGATCGCCAGCGTGCTGGAGGAGTGTGTGTGTACGCTGCTCCACATGGGCATGGAGGAGGAGGGCCTTTTCCGCATTGCTGGTAGTGCTTCCCGCCTGAAGAAGTTGAAGGCTGCCCTCAACTCTGGCATGGTCGACATGAGCGATTACATCATGGACATTCCCTGTGTTGCAAGTGCACTGAAGCAGTATTTGCGAGAGTTGCCTGAGCCATTGATGACACATGCTCTCTACAACGAGTGGATGACATCCGCCTACCTGGCACCTGAAGAAAGGGTGAATGTGTTTCGGGTGATATTAGAAAAGATGCCAACAGCGAACTACAATAACTTGAGATATTTAATAAAGTTCCTTGAGAAGCTATCAGAGAAGTCTGACGTGAACAAGATGACGGCCAGCAACATTGGCATTGTGATAGGCCCCAACCTGCTGTGGCCACCAGGCGACAACAGCCCAAGCGTAGTCAGTTCAGGAACGCAAGCATCCATTTGCGAGACGTTGATCCTCAATGCTGACACACTGTTTCCTGGTGCTGTAGACTTGCCCCGGACGGCCGGCTCGGCCTCACAGCTCCCTGACACACCCGCCAACTGTTTCCACATTGCCAGCCGCGGTGACAGGCCGACTGCTGTCACTACCGGCCTCACTCTCGCCCACCAGACTCTCGTAGTCCCGCTTACATCGCCACCCCCGGCACTGCTGTCCAGCGGAAGCACCCGGTCATCGACGCGGTCAAGCAGCTGCGGCCGGCAGCCCGAGGGGAGAGTGGACGTAGAACAGATGAGTGTGGACAGTGGGGTGAGTTGTGGGCCGGACTTTGGCAAGACGGCGAAGACAGAGCACAAGGACCGGAGTCTGATGAGAAGTAGCGATAATCTCATTGCTGCGGAAGTTTCGCCGGTTTCCCCCCGTCTCGGGGGGTCCACGCCAAACATCGCCCCCCAGCATAATTACCACAACGATCTGTATAACACAGCGTTTGCCCTGCACTCGCTCAGTAGTGCCGGCGGCTGGACGGACTACCTCAGTCAGGCCAGGTCTAAGTGGGACGAACGACTACGGCCACAGCTGGACAGTGGCTATGGTGTGGCGATGACCAGTAAGACGGACAGCAAGAACAGGGGTGAAGGGGCGGCTAACCCCAGCCCTGTTTTGGCGGTGGGGGGAGGAGAGGAGAAGAAAGAGGAGGACTTCATGTGTGGAGGGTGCAGCGACTCACCCAAGACAACCCCTCCTAGCACCCTCAACAAACCCCCACCAGCTGAGGGTGATTCAGAGCTGACCACCATCACTGAGCCGCTGATGGCCGCGTTACCCTCATGTTCTCCTGTGCCCCCTGGCGAGGGGTATAACCCCTTCTACGAAGGACCCACCACAAACAGCGCAGCTCGCAGCCCAAGGACAAATCGCCACGGGGTTAAGAAGCCCGCCCCCATGCCGCCAGGGGTAACACTGACCCCTGAGAAGTCGCCCGGACCGACAGAGAGTGGCTCGCATTCCTCGGTCAGCAGTGAAGACGCCCTCTCACTGGAGCGCTCACCCAGTGGGAAGCCGCCCTTGCCAGAACGCCCCAATGCACCCCCTCCCGCACCCCCAGAGAAGCCAACACTAACCAAAGTTGACTCGATTAATAGACCTGCAAATGGGGTGAGCAGTCCACGCCCCGATAGACCCAGGGGACCGCCCCCGGAGCGACCGCCCGGTCCGCTGCCAGATCGCCCCCATGACAGACCGATGGTGGCGCCCCCTGACAGACCACACGAGCGACAGACGTCGGTGTCCTCGGAACAAGCGTCCGGCGGCCAGCGCAGTGGCAAGCCACCCCCACCCCGCCCACTGCCTCCGCCCCGCAGCGCGCATAAAGACGCTCAGAAAGTGACAACAGGTGGCAGCACTTCAGACGAAACCGGGCAGTCAGCACCAGAGCGCACGGAGAGTAACGAATGTTCATCGCCTGTACCAGAGGAGACGCATCTCTAG

Transcript

OALVG00000000403.1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00620	RhoGAP	RhoGAP domain	Domain	Interproscan
PF03114	BAR	BAR domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000198	Domain	Rho GTPase-activating protein domain	Interproscan
IPR004148	Domain	BAR domain	Interproscan
IPR008936	Homologous_superfamily	Rho GTPase activation protein	Interproscan
IPR027267	Homologous_superfamily	AH/BAR domain superfamily	Interproscan
IPR047165	Family	Rho GTPase-activating protein 17/44/SH3BP1-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14130	3BP-1 RELATED RHOGAP	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005096	Molecular Function	GTPase activator activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005622	Cellular Component	intracellular anatomical structure	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan
GO:0032956	Biological Process	regulation of actin cytoskeleton organization	Interproscan
GO:0035020	Biological Process	regulation of Rac protein signal transduction	Interproscan
GO:0043547	Biological Process	positive regulation of GTPase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-