Gene detail

Detailed information of MBSQW58_g19611 in Bathyacmaea lactea Gene info

Gene ID	Annotation	Contig	Start	End	Strand
MBSQW58_g19611	IRON-SULFUR CLUSTER CO-CHAPERONE PROTEIN HSCB	ctg26	3368127	3371144	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

MBSQW58_g19611

ATGAATATTTCAACAAATCTTTGTCAACAAAATATTTCAAACACAGGATGGCAAGATATATTACCTATGTCATCTTATCAGATTTTGAAGATGCACACAACAGTAGTTAATTTACAACAAGAAAAACTTAGAACTTGTTGGAAATGTGGAAAACAAACAGACTTGGAAACTGAAATGTTTTTTTGCAAGTGCGGAGTGGTTCAAAAGGCAGAAACAAATATAACATATTTTCAATTATTTAGTCTGCAAAGTGCCTTTGATATTGATGCTAAAAAATTATCTGAGAAATATATTGACTTACAGAAAAATCTTCATCCTGATAAGTTTAGCCAAGCTTCAAAGGTAAACATAAGTCTCCAAGCAGTCCAGAACTCTGCTGGTATATTGATAGATAACTAAGAGCAAGCCATATTGTCTAGGTCCACTGCTTTTATTCAATTTTAATAAACGAAAAAAAAACCCATATAAGTGCAAAATTTCATGATTCTCACAATCAAGCAATGAAAAAAGAAAATAAACAGTTGACAACATCAAAAtgatcatccttgttgttgtacctgaaatatatcgtatgtagattctataataggttcttctgctgaatatcacatgagaaattcccatcatttattccagtctctgcacagtgataccgattgcaagatttctcatatatcatgaacacttgcggcttaataaggttcaataaacctgttgcagtacacttttaccaaaatatcagctatattatggttactggaattttgtcggctacatggaacccaaactaatcactttaaaaccatattcccaaatggcgtaaacaaacaatccacatactggtagtaagttacAGATAATTGTAATCTCCAGTATCAATTTTGTTACACTTTTCTTTCTCTCAATGGAATAGGAACAGGGAATCTCTCTTAAATAGATGATATCTTCTTTAATTTACAAGTGTTGTTAACTCCCTTGACCATTTCTAAAGGAATGTAAATCTTCCAACTATCAATTCCAATTTAACACTTGATGTGAAAGGATCATATTGGTGTTCCTGTTATATTGGTATTAAAAgtttttaatagcttgagaaagagataactcccaaaccgttggttgttatattggtattaatcaacatttcaccagcctattgtcatattttgcatatatTTGTCTTCTACTGCTTTTATATGCCCACATTGTAATTTGGTTATTATGTGTTTATTGGTTTGTCTGTCAGTCCGTTCACAGTTcactccacagtgttcaatggattttcttgaaacttgctgtgtcatcagttggacgaagcctatcaaaattcagtatttgtcctgcaaAAACTTTGTAAACACTACACAATAAATTTTCTTCTAAATGGCTTTTTCcttattgctgggtaataataattgtagtcagtggAAattattattattattattaCAGTTATCAGAGTAATTTTTAAAAACTTGATGTTAATTATTTCATAATaatgaaatagggcttattgtctactcaacaccaattgggtcatttcaagacatacatacggatatgtgtttttcatttggtttgcaatgcggcagaattttgctagggcagcggcaccatcacctactcttatatcgattttcaactgccgaggtgtctttaacgtgcactaccaattgcacatccgacagactagacatttttttctggatagccccaggaaccaggctggaaaagtcacctaggctgaaaccagcatttacctggattcaaactcgtgatctcctggttgacagtccagtttcacgaccatcgagccaccgcgactcctcattataatgaagaagtcctttaatattcagcatagtgccttatttagttattgcctttgccacacaaaccttgtgacctctctacagactgcagttatgaatggaatataacgaaactctctatTTATATTCAGCATCATACCACAATTGTATACCCAGCTATTTAtattttcccaaaatatgtgtgaacagttacatttcctgtgattttatttatctcattaatgaaaatgagtattgaatcacaattattaaagtagttatactatgcctctaaagctgcctgatcaataaagaatgtatgagcaaaccccacattgacgaccactcattTGCTATATTGACTATGATATACAACATGTCggtggccaactgttgggttagggtcttgcggaatctcaattataattgttattgtgtctctattgcggttttgataaCTTATTGTCATAAGAGAGTACTTATTTGCATGTATGTGCTGCAAACAAGACAGCTGAATGAGAAATTACTTTTAATCTCATGGATTATCGTATAGACCATAATCTGATTCAACCTGCATTAAATATAAAAACTGATGTTCATTATAAACCGCAGCTAGTGTCAATCATACAAACTTTTCTTGTCAATAATATCACTTACTGTTGCTATGCATATCTTTGTAGCTATGTCAACCAGAAAGGACATGACAAAAACAATGCTCTTTGTGAAAATGAGTCTGTTAAAAATCAGAAAAAATATCTGATGTTCAGAATGCCCTGGTATTTAAATATTTGTATCTATAATTTCTATTTTTTAGGAAGAAAGAGCTCATGCTGCAGAACAGTCTGCATTAGTGAATAAAGCTTATTTAATTCTCTCCAAACCGTTGTCAAGGGCGATCTATTTGCTGGAGATTCATAACAAACCAATAGAAGAATCAAGTGTCTTGTCCGAACCTGAATTTCTTGCAGAAATTATGGAAATTAATGAAGAGATTGCTGTTGTATCTTCTCCCAAAGAACTGAAGAAAATTGAAGAAGAAAATGTGGAGAAAATTTCTGTTTGCATTAACGGCTTATCAAATGCTTTCAATAATAATAATATAGACACAGCTCATAGTTTAACTGTACGTTATCAGTATTATGCAAACATAACTGAAAAAATTAAAGAACTTCACAGCAGCTGGATAAGTTGGGGCAATACTGAATAA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07743	HSCB_C	HSCB C-terminal oligomerisation domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001623	Domain	DnaJ domain	Interproscan
IPR004640	Family	Co-chaperone Hsc20	Interproscan
IPR009073	Domain	Co-chaperone HscB, C-terminal oligomerisation domain	Interproscan
IPR036386	Homologous_superfamily	HscB, C-terminal domain superfamily	Interproscan
IPR036869	Homologous_superfamily	Chaperone J-domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14021	IRON-SULFUR CLUSTER CO-CHAPERONE PROTEIN HSCB	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0001671	Molecular Function	ATPase activator activity	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0044571	Biological Process	[2Fe-2S] cluster assembly	Interproscan
GO:0051087	Molecular Function	protein-folding chaperone binding	Interproscan
GO:0051259	Biological Process	protein complex oligomerization	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-