Gene detail

Detailed information of MBSQW58_g14393 in Bathyacmaea lactea Gene info

Gene ID	Annotation	Contig	Start	End	Strand
MBSQW58_g14393	ATP7, ISOFORM B	ctg721	362448	365670	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

MBSQW58_g14393

ATGGATGCATTTTATGCATCAGTAGAAATACGAGATAATCCTCAGTATAAAGACAAACCACTTGCTGTTGGAGGAATGCCAGAAGATAGGAGTGTAATTTGTGCAGCAAGTTATGAGGCACGAAAATTTGGGGTTAAGAGTGCCATGGCATCAAGTCGAGCAGTACAACGATGTCCAAACCTCATTCTTGTGTATCCTCGTATGACTGTGTATAAAAAAATATCTAAACAAATACATTCTATTTTTCATCGTTATACCGATGTAGTGGAAGGGCTTGCGTATGATGAGGCATTTTTAGATGTTACAAATCCTAAAAAACCACACAAAGATAAATATGCAACACAGATTGCAAAAGATATTAAAAATGATATTTTGAACGAACTCAAACTGACCGCATCTGCTGGGGTTTCGTATAATAAATTTTTGGCAAAGCTCGCATCGGACGAAAAAAAACCAAATGGACTTTTGTTATTTTGCCCGAAATAGCACAAGATTATATTGCAAATTTAGCCATAGAACGGTTTTTTGGAATAGGACCCGTTACTGCAAAAAAAATGTATTCTCTTAATATCACCAATGGAAAAGATTTACAAAATTGTAATTATCAAAAACTAATTCAGCATTTTGGTGAAAAAATTTGCATTACATTATAAAAAATTTATCTCAAGCAATAGACAATAGAGATGTGCAGACAGAACGTAAAATTAAGTCTATTAGTGTAGAACATTCGTACACACCAAGTCTTAGAGAAAAAATGAAAATAATAACAAAAATAAAAATTTTGTGTACTCAATTAAAAGAAAGAATTGGCAGTAGAGATGTACATTCTCATACAATAAGTTTAAAAGTAAAATATGATAATTTTACGCTCTCAACAAGAAGTTATACCATGGAACATCCCATTTATACAGTTTCTGATTTTTTTACTCACGCACAAAATTTGTTAAATCAAGAAAAATTAAAAGATATGCCCATACGTTTATTAGGTATTGGAGTTTCTAATTTTAGAGAGCCTAGTAAACAAATAGATTTATTTAATATATAATGTTTATAAGAACATGATATTTTATCATGTAGTACATAAAAAAACTAGGAGCTTGTATGAATATAGATAATCAAAAAGACATTGTATGCAACATGACTGTAAAAAGTGATGAATACAAGTATGAATACAAAAATAAAGCATATGTTTTTGTGGACAGTCATGCAAAAAGAAAATTTGTAGAAGATCCATTTATTATATTTCAGAAACACATAAAAAACACAAACTAAAGACCGTAGAAGGGGTAAAATATACCTGTCCTATGCATCTAGAAATTGTAGAAGATGTGCCTGGAGATTGTGAAAAATGTGGTATGCCATTAGAGGCAATGGGAATTGTTAAAGATAATTCTGCCGAAAAAGAAACTAGAACGGCACAAAAACACTTTTTTATAAGTCTTATTTTTACCATTCCTGTGCTTTTTTTAAGCATGGGAGAAATACTTGCTATACCCATAGAAAAATGGATTAGCAATACAACAAATTCTTATATACAATTGTTGTTAGCAAGTATTGTGATATTTTGGGTGGCAAAACATATTTTTATAAAAGGCTACAAGGGATTTGTAAATAAAAGCCCTAATATGTGGTCTCTTATTAGTATTGGAGTGGGTACTGCATATATATATAGCATTGTtgcaactttttttccacatatttttcaaaatgtgtatctctaaaagaggtaccactttattttgaagtcatggtaacaattattaccttagtgtttttagggcaaataatggaagttggagcaaggaaaaaaagcaaaactgctgtagatgcacttattaacaaaatgccaacaaaggctatgcgtataaatagtgatgggagtgaatatgaggtgcctattaaaaatgtacacgaaggtaacttgttgcgaattagagaaggtgaaacagtgcctcttgatggaatagtagaatatggaagtacaagtgtagacgaaagcatgttaagtggagaacctgtacctgtagaaaaaagcatatcagattctattataggaggcactctcaataaaaatggaagtgttgttatgaaagttacatctgttggaacagatactgtattgtctcatattattAGTCTTATCTTGAAAGCTCAAAATTCACAAACACCTATGCAAAAAAAAGTAGATAAAATTTCGGCAGTATTTGTTCCCTTGTAATAACTATTGCAGGTATAACATTTATTACGTGGTTGTTGTTGGGTGCTAGTTTTGTGTTTGCCTTGTTTGCAACAATATCTGTTTTAATTATTGCCTGTCCTTGTGCACTTGGTTTGGCAACACCAATGTCTATTGTGGCATCTACTGGCATAGGAGCAAATAAGGGTATTTTAATACATAGTGCAACAGCTTTAGAGCTATTTGCACAGGTAAAAACTCTAATCATAGATAAAACAGGAACATTAACTGCGGGATTTTTAACATTAACCGATGTACTAATAGGCAATTCATCGTATAAAAAAGATGATGTGTTACAATTAAGCACTTTGTTAGAAAAAAGGTTCTTCTCATCCACTAGCTACCGCTGTATTAGGTGCTGCCGAAGAAAAGAACATACATGTAGAAGAAATTGATGATAGAACCAGCATTGTTGGAAAAGGAATATATGCAAAGGTTAAGGGAAAAACTATAAGTATTGGAAACGCTACTTTTTTGCAAGAAAGGGCTTGTAATACAAGTTATATGGATAATGACGTTGCAAAAATGCAAAACTTAGGAAAAAGTGTTGTGTATGTAGGGGTAGATACAACATTAGCAGGAGTTTTAGTTTTTGCTGATGAAATAAAAGAGAGTACAAAAAGTGCCATACCTCGCCTGCAAAAATATGGCATAGATGTTGTAGTTGCAAGTGGAGACCATAAAATAAGTGTAAGTGCAATAGCAAAAAGTCTTGGTATAGAAAAAATTCATGCACATTTGTTACCAGAGGATAAACAAAACATTGTAAAAGAATACAAAAAAATACACCATAAGGTTGCCATGGTAGGAGATGGAACTAATGATGCTCCAGCGTTAGCAGAGGCAGATGTAGGAATTGCCATGGGAACAGGCACTGATGTTGCTGTACAGTGCAAACATTACCCTTACCAAAAGGCAATATGGAAGGTTTGGTTAGGCTCCGAATACTTGCACTTGCAACAGTTAAAAACATCAAACAAAACTTAA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00122	E1-E2_ATPase	E1-E2 ATPase	Family	Interproscan
PF00702	Hydrolase	haloacid dehalogenase-like hydrolase	Domain	Interproscan
PF00817	IMS	impB/mucB/samB family	Family	Interproscan
PF19335	HMBD	Heavy metal binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001126	Domain	UmuC domain	Interproscan
IPR001757	Family	P-type ATPase	Interproscan
IPR008250	Homologous_superfamily	P-type ATPase, A domain superfamily	Interproscan
IPR022880	Family	DNA polymerase IV	Interproscan
IPR023214	Homologous_superfamily	HAD superfamily	Interproscan
IPR023299	Homologous_superfamily	P-type ATPase, cytoplasmic domain N	Interproscan
IPR036412	Homologous_superfamily	HAD-like superfamily	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR045800	Domain	Heavy metal binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43520	ATP7, ISOFORM B	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000166	Molecular Function	nucleotide binding	Interproscan
GO:0003887	Molecular Function	DNA-directed DNA polymerase activity	Interproscan
GO:0005215	Molecular Function	transporter activity	Interproscan
GO:0005507	Molecular Function	copper ion binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006281	Biological Process	DNA repair	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0043682	Molecular Function	P-type divalent copper transporter activity	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan
GO:0055070	Biological Process	copper ion homeostasis	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-