Gene detail

Detailed information of MBSQW58_g12588 in Bathyacmaea lactea Gene info

Gene ID	Annotation	Contig	Start	End	Strand
MBSQW58_g12588	CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE	ctg503	96613	103219	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

MBSQW58_g12588

atgacagaaagcatgacagaaagcatgacagaaagcatgacagaaagcatgacagaaagcatgacagaaagcatgacagaaagcatgacagaaagcatgacagaaagcatgaTGCATGACAATTATTcagttatgaaacatttgtaaccattatttttaatatttttgaactgcaaaaaatatgaatttattaatatgtttacgtaaaaacagacggtcgtttaataagatatggagaagtgattgagcagggacagtcgatcaatattctgtaaaagtacagatgtctgaaagtcttgttaagatattgtagcaggatataattattctactgtagaacaaacacaagaactgacacataatccaatgaatgatatgaatatttaaagaacttACCAAAcctaaccctaacccttaccctaaccctaacACAAGAACTGACACATAATCCAATGAATGATATGAATATTTAAAGAACTTACCAATTGAAGCTACTTTACCACAGGCTGTGTTACTGTAATGTGTAACATGTATTTTTTTGTGCAATTTATttgttaaaattcctgttagtcttaggacaaaaatgggtttgttttcatctacaatagggattttggatgttaaatataATAATAATAATAATTTACTTAAAAAGCGTTAAGACTTTGCCAGAGTAGCAGCACCCTCGTCTGTTGCCAAAATGTTTTTAACATGTTCCATCAATTATACAgagagccccacaaaccatactagaggcaccaggctggaaatctaaaatctctgtagcttgatattgtctatgagagccccacaaaccatactagaggcaccaggctggaaatctaaaatctctttagcttgatattgtctttgagagccccacaaaccatactagaggcaccaggctggaaatctaaaatctctgtagcttgatattgtctatgagagccccacaaaccatactagaggcaccaggctggaaatctaaaatctctgtagcttgatattgtctatgagagccccacaaaccatactagaggcaccaggctggaaatctaaaatctctttagcctgatattgtctttgagagccccacaaaccatactacaggcaccaggctggaaatctaaaatctctgtagcttgatattgtctatgagagccccacaaaccatactagaggcaccaggctggaaatctaaaatctctgtagcttgatattgtctatgagagccccacaaaccatactagaggcaccaggctggaaatctaaaatctctttagcttgatattgtctTTGTTTGTTTCAGGATTTTTATCATGAAGGTGAATATATAATCCGAGAAGGCGCTACTGGTGATTCTTtttttatcttgaataaaggagaggtgagatgatgtatttattatttttatcttgtataaaggagaggtgagatgatgtatttattatATTTGTTTTTGAGTAAAGATCACATATTGGTAGAAATGTGAgatgacttgtcacacctgtatctgttccaactaggatcatagcctggtataaatataggacgacttgtcacacctgtatctgttccaactaggatcatagcctggtagaaatgtgagacgacttgtcacacctgtatctgttccaactaggatcatagcctggtagaaatataggacaacttgtcacacctgtatctgttccaactaggatcatagcctggtagaaatataggatgacttgtcacacctgtatctgttccaactaggatcatagcctggtagaaatataggatgacttgtcacacctgtatctgttccaactaggatcatagtctggtataaatataggatgacttgtcacacctgtatctgttccaactaggatcatagtctggtagaaatataggatgacttgtcacacctgtatctgttccaactaggatcatagcctggtagaaatgtgggatgacttgtcacacctgtatctgttccaactaggatcatagcctggtagaaatataggatgacttgtcacacctgtatctgttccaactaggatcatagcctggtataaatataggacgacttgtcacacctgtatctgttccaactaggatcatagcctggtataaatataggacgacttgtcacacctgtatctgttccaactaggatcatagcctggtagaaatataggacgacttgtcacacctgtatctgttccaaactaggaccatagcctggtagaaatataggacgacttgtcacacctgtatctgttccaactaggatcatagcctggtagaaatataggatgacttgtcacacctgtatctgttccaactaggatcatagcctggtataaatataggaagacttgtcacacctgtatctgttccaactaggatcatagcctggtagaaatgttggatgaattgtcacacctgtatctgttccaactaggatcatagcctggtataaatataggatgacctttcacacctgtatctgttccaactaggatcatagcctggtataaatataggatgacctgtcacacctgtatctgttccaactaggatcatagcctggtagaaatataggatgacttgtcacacctgtatctgttccaactaggatcatagcctggtataaatataggacgacttgtcacacctgtatctgttccaactaggatcatagcctggtataaatatagaccacgacttgtcacctgtatctgttccaactaggatcatagcctggtagaaatatagggacgacttgtcacacctgtatctgttccaactaggatcatagcctggtagaaatataggacgacttgtcacacctgtatctgttccaactaggatcatagcctggtagaaatataggatgacttgtcacacctgtatctgttccaactaggatcatagcctggtataaatataggaagacttgtcacacctgtatctgttccaactaggatcatagcctggtagaaatgttggatgaattgtcacacctgtatctgttccaactaggatcatagcctggtataaatataggatgacctttcacacctgtatctgttccaactaggatcatagcctggtataaatataggatgacctgtcacacctgtatctgttccaactaggatcatagcctggtataaatataggacgacttgtcacacctgtatctgttccaactcggatcatagcctggtagaaatgtgggatgacttgtcacacctgtatctgttccaactaggatcatagcctggtataaatataggatgacttgtcacacctgtatctgttccaactaggatcatagcctggtataaatataggatgacttgtcacacctgtatctgttccaactaggatcatagcctggtataaatataggacgacttgtcacacctgtatctgttccaactaggatcatagcctggtataaatataggacgacttgtcacacctgtatctgttccaactcggatcatagcctggtataaatataggacgacttgccatacctgtatctgttccaactaggatcatagcctggtagaaatgttggatgacttgtcacacctgtatctgttccaactaggatcatagcctggtataaatataggatgacttgtcacacctgtatctgttccaactaggatcatagcctggtataaatataggatgacttgtcacacctgtatctgttccaactaggatcatagcctggtagaaatataggatgacttgtcacacctgtatctgttccaactaggatcatagcctggtagaaatataggatgacttgtcacacctgtatctgttccaactaggatcatagcctggtagaaatataggatgacttgtcacacctgtatctgttccaactaggatcatagcctggtagaaatataggatgacttgtcacacctgtatctgttccaactaggatcatagcctggtataaatataggacgacttgtcacacctgtatctgttccaactaggatcatagcctggtataaatataggatgacttgtcacacctgtatctgttccaactaggatcatagcctggtagaaatataggatgacttgtcacacctgtatctgttccaactaggatcatagcctggtataaatataggacgacttgtcacacctgtatctgttccaactaggatcatagcctggtataaatataggacgacttgtcacacctgtatctgttccaactaggatcatagcctggtataaatataggatgacttgtcatacctgtatctgttccaactaggatcatagcctggtataaatataggatgacttgtcacacctgtatctgttccaactaggatcatagcctggtagaaatataggacgacttgtcacacctgtatctgttccaactaggatcatagTCTTGAACTGCTGTCATTTTACCCATCACTGCTTTTGAAATACTTCTACTTACATAAACATCACACAATTCAGGTCATGCTACTTTCGAAACATTCATGATGACataaatatatacataccctactataatactctatatatatatagaatataCCTATCTCTTAATTAAAAGTCAATTGATCTGCGGAAGGGATAGTTTGTATCACCTTTATCACCTGTCAAATATTAGCGACAGCAGGTGTGAGTGTATTGAGTCTGCTTTTGATTCAAGATTATTGTATTGCAGGTCAAGGTCACGCAGAAAATTCAAGGTCATATTGACCCTCAAGAAATACGCAAGTTAAAACAAGGAGATTATTTCGGTGAAAAGGCTTTACTCAGGTAATATTTTAAATTTCAATTATTTCTTTATGTGTAATCTGTTAATCTTGCAGGTTTGATTGGCATTcaggtatttacagtacaggtatttacagtacaggtatttacagtacaggtatttacaggtatttacagtacaggtatttacagtacaggtatttacagtacaggtatttacagtacaggtatttacagtacaggtatttacagtacaggtatttacagtatttacaggtatttacaggtatttacagtacaggtatttacagtacaggtgtttacagtacaggtatttacagtacaggtgtttacagtacaggtatttacagtacaggtatttacagtacatgtatttacaggtatttacaggtatttacagtacaggtatttacaggtatttacagtacaggtatttacagtacagtttacagtatttacagtacaggtatttacagtacaggtatttacagtacagtatttacaggtacaggtatttacaggtaatatttacaggtatttacaggtacaggtggtatacaggtacaggtatttacagtacagatatttacagtacaggcatttacaggtattttttacaggtatttatacaggtgttttacagtacaggttttacaggtattgacagtacaggtatttacaggtatttacagtacaggtatttacagtacaggtatttacagtacaggtatttacagtacaggtatttacaggtatttacagtacaggtatttacagtacaggtatttacaggtatttacagtacaggtatttacagtacaggtatttacagtacaggtatttacagtacaggtatttacagtacaggtatttatagtacaggtatttacagtacaggtatttatagtacaggtatttatagtacaggtatttacagGTATTTACCTAAAATTCTAGATAATAAAAGAATCAAAGAACTACTGATTTCTATTAGCAGTGATTccgtaaacttcgggttattaagcgcatcgttatataagctgcatcccctaaattaaaaaaaaacagactttattactcgcaagccacactggttacacgaaaacaaaaagcgcaaaaacgtcaaaaaattagccacaaaaagtgagaaactcgactgccacagaaacttgtcagaaactcaactgccacagaaacttgtcagaaactcaactgccacagaaacttgtcagatgtgcgcaaagcacaaatttagtgacaaagcaacacagaaataaaaataaagcaacaccaaagatacacaataatacacataatcaaaacataccggtagtcacatttattcgtcgtcatcatttCcactgaagccactgaaagccattgctgcatcgctgaccccggtctcgttttcactgtcggaagttgtctgagcaaggacgatcaactgaatgtttcgtgtgtgtaaaggccgtgtgttaatttggaggaaaaaaacgttatcaacggttatcactagcacacttttacagtgagttttgaattcaaacctaatgtgaatctaaacatagactggagactgacgagaacttgatttgacctgaacgcgtcatcgtgaaaacctgcaacatcggaaaatccataaacaagttgcatcattattttagccgcagaggtcgaagatgaggaaaaaagtcgtgcctaatagtATATCGATAATTGGGATTTTTATATTTTCAGTGAAGATCGACGATCAGCTAATGTGATAGGCCTGCCCCCTGGTGTAGAATGTTTGACCGTAGATAGGGAGTAA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00027	cNMP_binding	Cyclic nucleotide-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000595	Domain	Cyclic nucleotide-binding domain	Interproscan
IPR002374	Family	cGMP-dependent kinase	Interproscan
IPR014710	Homologous_superfamily	RmlC-like jelly roll fold	Interproscan
IPR018488	Conserved_site	Cyclic nucleotide-binding, conserved site	Interproscan
IPR018490	Homologous_superfamily	Cyclic nucleotide-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24353	CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004692	Molecular Function	cGMP-dependent protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-