Detailed information of Lsat_s082.g0017.t1 in Lamellibrachia satsuma Gene info
Gene IDAnnotationScaffoldStartEndStrand
Lsat_s082.g0017.t1UNCHARACTERIZEDLsat_scaffold082559883632457+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01058Oxidored_q6NADH ubiquinone oxidoreductase, 20 Kd subunitFamilyInterproscan
PF07539UTP20_NU3 small nucleolar RNA-associated protein 20, N-terminalDomainInterproscan
PF20416UTP20_CU3 small nucleolar RNA-associated protein 20, C-terminalDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR006137DomainNADH:ubiquinone oxidoreductase-like, 20kDa subunitInterproscan
IPR006138FamilyNADH-ubiquinone oxidoreductase, 20 Kd subunitInterproscan
IPR011430DomainU3 small nucleolar RNA-associated protein 20, N-terminalInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR046523DomainU3 small nucleolar RNA-associated protein 20, C-terminalInterproscan
IPR052575FamilySmall subunit processome component 20Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR17695UNCHARACTERIZEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0008137Molecular FunctionNADH dehydrogenase (ubiquinone) activityInterproscan
GO:0030686Cellular Component90S preribosomeInterproscan
GO:0032040Cellular Componentsmall-subunit processomeInterproscan
GO:0048038Molecular Functionquinone bindingInterproscan
GO:0051536Molecular Functioniron-sulfur cluster bindingInterproscan
GO:0051539Molecular Function4 iron, 4 sulfur cluster bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

TOP